RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 EFCAB1Q9HAE3 211 aa12.53□□□□□ -0.4
TRAIP-210ENST00000489948 NDE1Q9NXR1 346 aa12.53□□□□□ -0.4
TRAIP-210ENST00000489948 TAS2R9Q9NYW1 312 aa12.53□□□□□ -0.4
TRAIP-210ENST00000489948 NEUROG3Q9Y4Z2 214 aa12.53□□□□□ -0.4
TRAIP-210ENST00000489948 A0A1W2PQ72 361 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 WASHC1A8K0Z3 465 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 IDSB3KWA1 339 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 PLOD2O00469 737 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 RFXANKO14593 260 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 KLF7O75840 302 aaPredicted RBP12.52□□□□□ -0.41
TRAIP-210ENST00000489948 KCNH1O95259 989 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 MAOAP21397 527 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 NCBP2P52298 156 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAIP-210ENST00000489948 MANFP55145 182 aaKnown RBP12.52□□□□□ -0.41
TRAIP-210ENST00000489948 HBA1P69905 142 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 BTG2P78543 158 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 DUSP2Q05923 314 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 STX4Q12846 297 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 ERV3-1Q14264 604 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 ZSCAN26Q16670 478 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 SPRED3Q2MJR0 410 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 LACTB2Q53H82 288 aaPredicted RBP12.52□□□□□ -0.41
TRAIP-210ENST00000489948 DLEU7Q6UYE1 221 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 DHDDSQ86SQ9 333 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 ANKRD46Q86W74 232 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 CLECL1Q8IZS7 167 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 TRIML2Q8N7C3 387 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 SFXN5Q8TD22 340 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 CT55Q8WUE5 264 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 NACC2Q96BF6 587 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 PANX1Q96RD7 426 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 GPR87Q9BY21 358 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 TRIM4Q9C037 500 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 PAIP1Q9H074 479 aaKnown RBP12.52□□□□□ -0.41
TRAIP-210ENST00000489948 ADAP2Q9NPF8 381 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 NECTIN3Q9NQS3 549 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 SIRT3Q9NTG7 399 aaPredicted RBP12.52□□□□□ -0.41
TRAIP-210ENST00000489948 GID8Q9NWU2 228 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 NTMQ9P121 344 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 MAP10Q9P2G4 905 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 KLK13Q9UKR3 277 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 MKL2Q9ULH7 1088 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 PCDHGA6Q9Y5G7 932 aa12.52□□□□□ -0.41
TRAIP-210ENST00000489948 CCDC88CQ9P219 2028 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 A0A087WV62 115 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 C15orf38-AP3S2A0A0A6YYH1 394 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 A0A1W2PS29 197 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 BRINP1O60477 761 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 C6orf47O95873 294 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 IGHEP01854 428 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 HEXBP07686 556 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 KRT16P08779 473 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 LIPCP11150 499 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 CPOXP36551 454 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 FEN1P39748 380 aaKnown RBP12.51□□□□□ -0.41
TRAIP-210ENST00000489948 NUDT2P50583 147 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 FOXC1Q12948 553 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 NFYCQ13952 458 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 ELAVL1Q15717 326 aaKnown RBP12.51□□□□□ -0.41
TRAIP-210ENST00000489948 ZNF628Q5EBL2 1059 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 C6orf10Q5SRN2 563 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 MLIPQ5VWP3 458 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 FAM199XQ6PEV8 388 aaPredicted RBP12.51□□□□□ -0.41
TRAIP-210ENST00000489948 TMEM205Q6UW68 189 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 GPR155Q7Z3F1 870 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 ARPINQ7Z6K5 226 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 ENDOVQ8N8Q3 282 aaKnown RBP12.51□□□□□ -0.41
TRAIP-210ENST00000489948 OR4A15Q8NGL6 344 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 TSLPQ969D9 159 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 MOAP1Q96BY2 351 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 CTHRC1Q96CG8 243 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 RNF31Q96EP0 1072 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 PTCHD1Q96NR3 888 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 DGAT2Q96PD7 388 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 NPAS2Q99743 824 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 GPATCH1Q9BRR8 931 aaKnown RBP12.51□□□□□ -0.41
TRAIP-210ENST00000489948 CRB3Q9BUF7 120 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 ALOXE3Q9BYJ1 711 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 SEMA3GQ9NS98 782 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 PTGFRNQ9P2B2 879 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 C19orf25Q9UFG5 118 aaPredicted RBP12.51□□□□□ -0.41
TRAIP-210ENST00000489948 C3orf18Q9UK00 162 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 VPS4AQ9UN37 437 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 PCDHGB4Q9UN71 923 aa12.51□□□□□ -0.41
TRAIP-210ENST00000489948 NUP214P35658 2090 aaPredicted RBP12.5□□□□□ -0.41
TRAIP-210ENST00000489948 LOC102723996A0A087X1L8 192 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 OR10H2O60403 315 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 PLOD3O60568 738 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 ALOX12BO75342 701 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 PSMG1O95456 288 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 UMODP07911 640 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 C8orf89P0DMQ9 161 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 FOLR3P41439 243 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 CDKN2CP42773 168 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 MAGEA8P43361 318 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 ID4P47928 161 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 CPA2P48052 419 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 RASSF2P50749 326 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 CDK9P50750 372 aaKnown RBP12.5□□□□□ -0.41
TRAIP-210ENST00000489948 ID2Q02363 134 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms