RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 NTSR1P30989 418 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 BCL6P41182 706 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 IDH2P48735 452 aaKnown RBP9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 CCT3P49368 545 aaKnown RBP9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 HMGA2P52926 109 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 UGT2B15P54855 530 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 KIAA1024LP59773 190 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 RPS26P62854 115 aaKnown RBP9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 SFSWAPQ12872 951 aaKnown RBP9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 GNA13Q14344 377 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 GANABQ14697 944 aaKnown RBP9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 CTF1Q16619 201 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 DGUOKQ16854 277 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 UAP1L1Q3KQV9 507 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 TOR1AIP1Q5JTV8 583 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 COLEC12Q5KU26 742 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 C16orf87Q6PH81 154 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 BHLHB9Q6PI77 547 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 SYCE2Q6PIF2 218 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 TMEM184AQ6ZMB5 413 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 UBE3DQ7Z6J8 389 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 PLD3Q8IV08 490 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 SLC44A2Q8IWA5 706 aaPredicted RBP9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 AQP11Q8NBQ7 271 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 SRFBP1Q8NEF9 429 aaKnown RBP9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 OR9Q2Q8NGE9 314 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 OR52E1Q8NGJ3 308 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 OR2A1Q8NGT9 310 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 RHOXF1Q8NHV9 184 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 C9orf43Q8TAL5 461 aaPredicted RBP9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 UTP15Q8TED0 518 aaKnown RBP9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 SLC38A5Q8WUX1 472 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 TRUB1Q8WWH5 349 aaKnown RBP9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 S100ZQ8WXG8 99 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 SLC38A4Q969I6 547 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 FAM131CQ96AQ9 280 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 PLEKHA8Q96JA3 519 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 ALPK1Q96QP1 1244 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 OR2M4Q96R27 311 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 NRTNQ99748 197 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 GABRG3Q99928 467 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 C17orf62Q9BQA9 187 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 SPATA5L1Q9BVQ7 753 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 ITPAQ9BY32 194 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 NKX2-4Q9H2Z4 354 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 KIR3DX1Q9H7L2 352 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 ANKHQ9HCJ1 492 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 HMG20AQ9NP66 347 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 SLC6A20Q9NP91 592 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 GIMAP4Q9NUV9 329 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 TBCCD1Q9NVR7 557 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 FKBP14Q9NWM8 211 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 LYARQ9NX58 379 aaKnown RBP9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 TRPC4Q9UBN4 977 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 FTSJ1Q9UET6 329 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 SCML1Q9UN30 329 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 DOLKQ9UPQ8 538 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 MGAT4BQ9UQ53 548 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 B3GNT3Q9Y2A9 372 aa9.05□□□□□ -0.96
RAB3GAP1-205ENST00000489858 TRPM6Q9BX84 2022 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 TICRRQ7Z2Z1 1910 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 PLXND1Q9Y4D7 1925 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 hCG_2014768A0A024R1R8 64 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 A0A0G2JN53 185 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 SH3D21A4FU49 640 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 LRIT2A6NDA9 550 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 EFCAB10A6NFE3 127 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 CLDN24A6NM45 220 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 CLDN25C9JDP6 229 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 ANHXE9PGG2 379 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 J3KTA2 159 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 HMGN4O00479 90 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 GNB5O14775 395 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 PCDH17O14917 1159 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 HAT1O14929 419 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 ERI3O43414 337 aaKnown RBP9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 LCMT2O60294 686 aaKnown RBP9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 MFN2O95140 757 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 ZBTB11O95625 1053 aaPredicted RBP9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 RECKO95980 971 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 H1F0P07305 194 aaKnown RBP9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 HOXC4P09017 264 aaPredicted RBP9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 NR2F1P10589 423 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 EPXP11678 715 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 HOXB2P14652 356 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 CD36P16671 472 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 ZNF12P17014 697 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 NR4A1P22736 598 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 ACVR2AP27037 513 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 CD6P30203 668 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 TGFBR2P37173 567 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 KIR2DL1P43626 348 aaPredicted RBP9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 TSFMP43897 325 aaKnown RBP9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 SOX9P48436 509 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 KCNJ5P48544 419 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 NCBP2P52298 156 aaKnown RBP eCLIP9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 ADPRHP54922 357 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 STXBP1P61764 594 aaKnown RBP9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 DGCR6Q14129 220 aa9.04□□□□□ -0.96
RAB3GAP1-205ENST00000489858 LRRC32Q14392 662 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms