RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 TAF1P21675 1872 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 LOC390937A0A1W2PQ73 354 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 PLSCR5A0PG75 271 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 A8MVJ9 347 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 C19orf81C9J6K1 198 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 L7N2F9 121 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 DCLK1O15075 740 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC19A2O60779 497 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 KDM4BO94953 1096 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 ZNF682O95780 498 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 HPP00738 406 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 G6PDP11413 515 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 MTHFD2P13995 350 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 ENGP17813 658 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 NFYAP23511 347 aaPredicted RBP4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 TM4SF1P30408 202 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 ACSL1P33121 698 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 GPX4P36969 197 aaPredicted RBP4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 PBX3P40426 434 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 TSPAN7P41732 249 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 KCNJ3P48549 501 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 IDH2P48735 452 aaKnown RBP4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 FNTBP49356 437 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 STAT5BP51692 787 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 VSX2P58304 361 aaPredicted RBP4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 KIAA1024LP59773 190 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 CDC42P60953 191 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 TSPAN5P62079 268 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 HTRA3P83110 453 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 MXD1Q05195 221 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 ABHD18Q0P651 414 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 MLLT11Q13015 90 aaPredicted RBP4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 DUSP4Q13115 394 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 KCTD2Q14681 263 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 PGM5Q15124 567 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 PTPRRQ15256 657 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 P2RY14Q15391 338 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 TTLL9Q3SXZ7 439 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 HECTD3Q5T447 861 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 AVPI1Q5T686 147 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 SYPL2Q5VXT5 272 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 DHRS7BQ6IAN0 325 aaPredicted RBP4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 HAGHLQ6PII5 290 aaPredicted RBP4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 TMEM207Q6UWW9 146 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 Q6ZSR9 355 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC16A13Q7RTY0 426 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 TMEM17Q86X19 198 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 SKA3Q8IX90 412 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 ATPAF2Q8N5M1 289 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 NANOGP1Q8N7R0 232 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 PROKR2Q8NFJ6 384 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 OR2T35Q8NGX2 323 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 RNF139Q8WU17 664 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 CHURC1Q8WUH1 139 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 NUDT8Q8WV74 236 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 TMEM41AQ96HV5 264 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 NARS2Q96I59 477 aaKnown RBP4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 PAWRQ96IZ0 340 aaKnown RBP4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 FCRL1Q96LA6 429 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 PKMYT1Q99640 499 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 SMAD5Q99717 465 aaKnown RBP4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 TBL1YQ9BQ87 522 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 CCM2Q9BSQ5 444 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 KATNB1Q9BVA0 655 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 C1QTNF3Q9BXJ4 246 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 TMPRSS13Q9BYE2 586 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 ACTR6Q9GZN1 396 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 ADAM19Q9H013 955 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 HDHD2Q9H0R4 259 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 QRSL1Q9H0R6 528 aaKnown RBP4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 ALX4Q9H161 411 aaPredicted RBP4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 ACTL8Q9H568 366 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 MROH8Q9H579 483 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 IKZF5Q9H5V7 419 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 SLAMF7Q9NQ25 335 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC25A37Q9NYZ2 338 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 COMMD3Q9UBI1 195 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 GPR160Q9UJ42 338 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 ATXN7L1Q9ULK2 861 aaPredicted RBP4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 POFUT2Q9Y2G5 429 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 CBY1Q9Y3M2 126 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 ASB1Q9Y576 335 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 DMRT1Q9Y5R6 373 aa4.54□□□□□ -1.68
SNRNP40-206ENST00000489853 TRBV5-3A0A0A0MS03 114 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 A0A0U1RQF3 1178 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 A0A1W2PQU0 124 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 LRRC14BA6NHZ5 514 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ANXA2P2A6NMY6 339 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 TEX46H3BTG2 121 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ARVCFO00192 962 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC28A2O43868 658 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 CACNG3O60359 315 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 POP7O75817 140 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ANXA9O76027 345 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 ATG12O94817 140 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 GADD45GO95257 159 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 GLP2RO95838 553 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 MT-CYBP00156 380 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 IGHA1P01876 353 aa4.53□□□□□ -1.68
SNRNP40-206ENST00000489853 TCRBP04435 133 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms