RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 CRYMQ14894 314 aa14.76□□□□□ -0.05
USP48-210ENST00000489108 PRAMEF9Q5VWM5 478 aa14.76□□□□□ -0.05
USP48-210ENST00000489108 SLC29A4Q7RTT9 530 aa14.76□□□□□ -0.05
USP48-210ENST00000489108 ACOT4Q8N9L9 421 aa14.76□□□□□ -0.05
USP48-210ENST00000489108 PIK3IP1Q96FE7 263 aa14.76□□□□□ -0.05
USP48-210ENST00000489108 FBXL20Q96IG2 436 aa14.76□□□□□ -0.05
USP48-210ENST00000489108 RILPQ96NA2 401 aa14.76□□□□□ -0.05
USP48-210ENST00000489108 TUBA1CQ9BQE3 449 aa14.76□□□□□ -0.05
USP48-210ENST00000489108 WWTR1Q9GZV5 400 aa14.76□□□□□ -0.05
USP48-210ENST00000489108 C15orf41Q9Y2V0 281 aa14.76□□□□□ -0.05
USP48-210ENST00000489108 IQANK1A0A1B0GTG1 560 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 NPEPPSL1A6NEC2 478 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 DYRK3O43781 588 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 SNX4O95219 450 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 NID1P14543 1247 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 CPN2P22792 545 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 SLC6A12P48065 614 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 KCNC1P48547 511 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 MASP1P48740 699 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 PTH2RP49190 550 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 HNMTP50135 292 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 FBXW4P57775 412 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 HERVK_113P63132 956 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 ERVK-8P63133 956 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 CDKL1Q00532 357 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 KRTAP1-1Q07627 177 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 FAM27E3Q08E93 113 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 YRDCQ86U90 279 aaKnown RBP14.75□□□□□ -0.05
USP48-210ENST00000489108 PACS2Q86VP3 889 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 NTNG2Q96CW9 530 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 ART5Q96L15 291 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 KCNC2Q96PR1 638 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 ERVK-6Q9BXR3 956 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 ANGPTL4Q9BY76 406 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 GSX2Q9BZM3 304 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 PITHD1Q9GZP4 211 aaPredicted RBP14.75□□□□□ -0.05
USP48-210ENST00000489108 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.75□□□□□ -0.05
USP48-210ENST00000489108 KLHL28Q9NXS3 571 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 ERVK-19Q9WJR5 959 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 SPACA6W5XKT8 324 aa14.75□□□□□ -0.05
USP48-210ENST00000489108 TP53I11O14683 189 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 GNB5O14775 395 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 SNPHO15079 494 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 PGAM1P18669 254 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 MC3RP41968 323 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 ZNF75DP51815 510 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 ZNF267Q14586 743 aaPredicted RBP14.74□□□□□ -0.05
USP48-210ENST00000489108 EBPQ15125 230 aaKnown RBP14.74□□□□□ -0.05
USP48-210ENST00000489108 TEDDM1Q5T9Z0 273 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 FAM45BPQ6NSW5 357 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 TTC27Q6P3X3 843 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 RNF111Q6ZNA4 994 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 CNTN4Q8IWV2 1026 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 GCNT2Q8N0V5 402 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 TAGAPQ8N103 731 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 NAT8LQ8N9F0 302 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 BBOF1Q8ND07 529 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 C7orf57Q8NEG2 295 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 FAM45AQ8TCE6 357 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 SPPL2AQ8TCT8 520 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 RHBDF1Q96CC6 855 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 ZFP3Q96NJ6 502 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 TM9SF2Q99805 663 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 TBCDQ9BTW9 1192 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 CAPS2Q9BXY5 557 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 ROGDIQ9GZN7 287 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 PIGMQ9H3S5 423 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 TEX10Q9NXF1 929 aaPredicted RBP14.74□□□□□ -0.05
USP48-210ENST00000489108 OARD1Q9Y530 152 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 WIF1Q9Y5W5 379 aa14.74□□□□□ -0.05
USP48-210ENST00000489108 RAI1Q7Z5J4 1906 aaPredicted RBP14.73□□□□□ -0.05
USP48-210ENST00000489108 SH3BGRLO75368 114 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 ACTL6AO96019 429 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 CPN1P15169 458 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 ALOX15P16050 662 aaPredicted RBP14.73□□□□□ -0.05
USP48-210ENST00000489108 CPOXP36551 454 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 CASP3P42574 277 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 DIO3P55073 304 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 SLC37A1P57057 533 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 SRYQ05066 204 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 DOC2AQ14183 400 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 RPS6KA2Q15349 733 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 C20orf204Q6ZNR8 217 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 GALNT7Q86SF2 657 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 ZNF441Q8N8Z8 693 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 SRFBP1Q8NEF9 429 aaKnown RBP14.73□□□□□ -0.05
USP48-210ENST00000489108 FAM83FQ8NEG4 500 aaPredicted RBP14.73□□□□□ -0.05
USP48-210ENST00000489108 SECISBP2Q96T21 854 aaKnown RBP14.73□□□□□ -0.05
USP48-210ENST00000489108 PIGQQ9BRB3 760 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 RPF2Q9H7B2 306 aaKnown RBP14.73□□□□□ -0.05
USP48-210ENST00000489108 RYDENQ9NUL5 291 aaKnown RBP14.73□□□□□ -0.05
USP48-210ENST00000489108 USF3Q68DE3 2245 aa14.73□□□□□ -0.05
USP48-210ENST00000489108 NCF1BA6NI72 391 aaPredicted RBP14.72□□□□□ -0.05
USP48-210ENST00000489108 WASHC1A8K0Z3 465 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 NCF1CA8MVU1 366 aaPredicted RBP14.72□□□□□ -0.05
USP48-210ENST00000489108 CAPN14A8MX76 684 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 CLGNO14967 610 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 BANF1O75531 89 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 CLPSP04118 112 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 NCF1P14598 390 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms