RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 RIT1Q92963 219 aa21.26■□□□□ 0.99
COL9A3-213ENST00000489045 ELOVL6Q9H5J4 265 aa21.26■□□□□ 0.99
COL9A3-213ENST00000489045 CHST11Q9NPF2 352 aa21.26■□□□□ 0.99
COL9A3-213ENST00000489045 SACM1LQ9NTJ5 587 aa21.26■□□□□ 0.99
COL9A3-213ENST00000489045 PKDREJQ9NTG1 2253 aa21.26■□□□□ 0.99
COL9A3-213ENST00000489045 IQANK1A0A1B0GTG1 560 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 PPP6CO00743 305 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 PGRMC2O15173 223 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 CLDN14O95500 239 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 OTCP00480 354 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 P04436 131 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 DNASE1L1P49184 302 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 CDH13P55290 713 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 LGSNQ5TDP6 509 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 LETMD1Q6P1Q0 360 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 RNF111Q6ZNA4 994 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 RGS9BPQ6ZS82 235 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 TRMT10CQ7L0Y3 403 aaKnown RBP21.25■□□□□ 0.99
COL9A3-213ENST00000489045 SLC29A4Q7RTT9 530 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 SLC22A16Q86VW1 577 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 IFT20Q8IY31 132 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 GAL3ST4Q96RP7 486 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 C1QTNF3Q9BXJ4 246 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 ZDHHC11Q9H8X9 412 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 FARSBQ9NSD9 589 aaKnown RBP21.25■□□□□ 0.99
COL9A3-213ENST00000489045 ADAM29Q9UKF5 820 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 NCKAP5O14513 1909 aa21.25■□□□□ 0.99
COL9A3-213ENST00000489045 A0A1W2PS29 197 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 RIPK2O43353 540 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 GLSO94925 669 aaPredicted RBP21.24■□□□□ 0.99
COL9A3-213ENST00000489045 KLK1P06870 262 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 SLC35E2P0CK97 266 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 GALNSP34059 522 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 SLC37A1P57057 533 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 EBPQ15125 230 aaKnown RBP21.24■□□□□ 0.99
COL9A3-213ENST00000489045 ZNF791Q3KP31 576 aaPredicted RBP21.24■□□□□ 0.99
COL9A3-213ENST00000489045 TEX35Q5T0J7 233 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 NDUFAF5Q5TEU4 345 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 FAM219BQ5XKK7 198 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 PAOXQ6QHF9 649 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 ADGRD1Q6QNK2 874 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 LYPD8Q6UX82 237 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 MCEMP1Q8IX19 187 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 MTBPQ96DY7 904 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 SPACA9Q96E40 222 aaPredicted RBP21.24■□□□□ 0.99
COL9A3-213ENST00000489045 WWTR1Q9GZV5 400 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 AHSPQ9NZD4 102 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 SLC12A4Q9UP95 1085 aa21.24■□□□□ 0.99
COL9A3-213ENST00000489045 PHF3Q92576 2039 aaKnown RBP21.24■□□□□ 0.99
COL9A3-213ENST00000489045 EXPH5Q8NEV8 1989 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 CLPSP04118 112 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 RHOXF2BP0C7M4 288 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 PIK3R1P27986 724 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 CCNYL2Q5T2Q4 361 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 TIFABQ6ZNK6 161 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 PAGE2Q7Z2X7 111 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 METTL4Q8N3J2 472 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 SLC15A4Q8N697 577 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 TMEM251Q8N6I4 163 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 MYRIPQ8NFW9 859 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 RHOXF2Q9BQY4 288 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 RUBCNLQ9H714 662 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 IL1RL2Q9HB29 575 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 SH2D2AQ9NP31 389 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 TUBA8Q9NY65 449 aaPredicted RBP21.23■□□□□ 0.99
COL9A3-213ENST00000489045 TMEM216Q9P0N5 145 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 HRH3Q9Y5N1 445 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 LIPGQ9Y5X9 500 aa21.23■□□□□ 0.99
COL9A3-213ENST00000489045 OR6C76A6NM76 312 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 PDYNP01213 254 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 SNRPB2P08579 225 aaKnown RBP21.22■□□□□ 0.99
COL9A3-213ENST00000489045 FAM153BP0C7A2 387 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 TAC1P20366 129 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 PIGAP37287 484 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 MAGEA5P43359 124 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 FOXO1Q12778 655 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 FAM153CQ494X1 144 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 COMMD6Q7Z4G1 85 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 FAM109AQ8N4B1 249 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 TRPC4APQ8TEL6 797 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 SELENOMQ8WWX9 145 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 TRPS1Q9UHF7 1281 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 ZNF225Q9UK10 706 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 SNX6Q9UNH7 406 aa21.22■□□□□ 0.99
COL9A3-213ENST00000489045 NINQ8N4C6 2090 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 C19orf84I3L1E1 186 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 OR4F21O95013 312 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 COX6B1P14854 86 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 SSTR4P31391 388 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 HSD17B3P37058 310 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 MAPK12P53778 367 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 CLCQ05315 142 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 SLC22A10Q63ZE4 541 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 GALNT12Q8IXK2 581 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 SRRM1Q8IYB3 904 aaKnown RBP21.21■□□□□ 0.99
COL9A3-213ENST00000489045 MARVELD2Q8N4S9 558 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 OR4K14Q8NGD5 310 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 PAQR8Q8TEZ7 354 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 SDCCAG3Q96C92 435 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 TMEM237Q96Q45 408 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms