RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 PCNAP12004 261 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 CD1DP15813 335 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 CASP2P42575 452 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 ARL4CP56559 192 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 POU4F1Q01851 419 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 TNFRSF17Q02223 184 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 BIKQ13323 160 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 FASTKD3Q14CZ7 662 aaKnown RBP17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 SPRED3Q2MJR0 410 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 TBCELQ5QJ74 424 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 KHDRBS2Q5VWX1 349 aaKnown RBP17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 NSUN5P2Q63ZY6 315 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 TMEM198Q66K66 360 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 C18orf63Q68DL7 685 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 RNF111Q6ZNA4 994 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 CHSY3Q70JA7 882 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 KRTAP1-3Q8IUG1 177 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 LAS2Q8IYD9 372 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 PM20D2Q8IYS1 436 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 ST13P4Q8IZP2 240 aaPredicted RBP17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 SLC35F6Q8N357 371 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 FBXO36Q8NEA4 188 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 DIO2Q92813 273 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 TANKQ92844 425 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 UBE2E3Q969T4 207 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 EPB41L4BQ9H329 900 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 OR51B5Q9H339 312 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 RYDENQ9NUL5 291 aaKnown RBP17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 MS4A12Q9NXJ0 267 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 NSMCE4AQ9NXX6 385 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 CD274Q9NZQ7 290 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 SNX12Q9UMY4 172 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 MTO1Q9Y2Z2 717 aaKnown RBP17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 ANKRD33BA6NCL7 494 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 CLCA1A8K7I4 914 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 PHGDHO43175 533 aaKnown RBP17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 TRAPPC6AO75865 159 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 CLPSP04118 112 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 ADSLP30566 484 aaPredicted RBP17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 CDK9P50750 372 aaKnown RBP17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 AGFG1P52594 562 aaKnown RBP17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 HNRNPH2P55795 449 aaKnown RBP17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 SLC37A1P57057 533 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 SORDQ00796 357 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 ZNF267Q14586 743 aaPredicted RBP17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 DEPDC1Q5TB30 811 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 BICRALQ6AI39 1079 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 OR4C11Q6IEV9 310 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 MED27Q6P2C8 311 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 TMEM64Q6YI46 380 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 LRRC70Q7Z2Q7 622 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 GPR180Q86V85 440 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 RNF175Q8N4F7 328 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 EXT2Q93063 718 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 CMTM7Q96FZ5 175 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 TRIB1Q96RU8 372 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 CD244Q9BZW8 370 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 UBQLN3Q9H347 655 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 SMYD2Q9NRG4 433 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 PHF11Q9UIL8 331 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 CAMK2AQ9UQM7 478 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 SLC6A5Q9Y345 797 aa17.81■□□□□ 0.44
SMPDL3A-202ENST00000487215 CD8B2A6NJW9 211 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 EEF1E1-BLOC1S5C9J1V9 151 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 EEF1E1O43324 174 aaKnown RBP17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 ACSL3O95573 720 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 HPNP05981 417 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 INHBBP09529 407 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 TCP1P17987 556 aaKnown RBP17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 SERPINB1P30740 379 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 ATP6V0D1P61421 351 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 DCAF7P61962 342 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 PDIA2Q13087 525 aaKnown RBP17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 RPS6KA2Q15349 733 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 SF3B4Q15427 424 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 VASNQ6EMK4 673 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 SYDE1Q6ZW31 735 aaPredicted RBP17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 TAGAPQ8N103 731 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 OR7G3Q8NG95 312 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 PELOQ9BRX2 385 aaKnown RBP17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 NEUROD4Q9HD90 331 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 JKAMPQ9P055 326 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 IKBKGQ9Y6K9 419 aa17.8■□□□□ 0.44
SMPDL3A-202ENST00000487215 KIAA1549Q9HCM3 1950 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 MBD3L4A6NDZ8 208 aaPredicted RBP17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 MBD3L3A6NE82 208 aaPredicted RBP17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 MBD3L5A6NJ08 208 aaPredicted RBP17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 OR6C76A6NM76 312 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 WASHC1A8K0Z3 465 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 PLPP1O14494 284 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 TP53I11O14683 189 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 TP73O15350 636 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 OR10H2O60403 315 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 GOSR1O95249 250 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 S100BP04271 92 aaPredicted RBP17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 CD53P19397 219 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 CTSSP25774 331 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 RAP1GDS1P52306 607 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 FBXW4P57775 412 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 DDX39BQ13838 428 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms