RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 TIMP2P16035 220 aa12.75□□□□□ -0.37
HDLBP-241ENST00000487169 PRDX3P30048 256 aaKnown RBP12.75□□□□□ -0.37
HDLBP-241ENST00000487169 SLC6A11P48066 632 aa12.75□□□□□ -0.37
HDLBP-241ENST00000487169 TYSND1Q2T9J0 566 aa12.75□□□□□ -0.37
HDLBP-241ENST00000487169 GRHL2Q6ISB3 625 aa12.75□□□□□ -0.37
HDLBP-241ENST00000487169 DPY19L2P1Q6NXN4 242 aa12.75□□□□□ -0.37
HDLBP-241ENST00000487169 VTCN1Q7Z7D3 282 aa12.75□□□□□ -0.37
HDLBP-241ENST00000487169 ERI1Q8IV48 349 aaKnown RBP12.75□□□□□ -0.37
HDLBP-241ENST00000487169 FAM86B1Q8N7N1 296 aa12.75□□□□□ -0.37
HDLBP-241ENST00000487169 OR13J1Q8NGT2 312 aa12.75□□□□□ -0.37
HDLBP-241ENST00000487169 ZDHHC1Q8WTX9 485 aa12.75□□□□□ -0.37
HDLBP-241ENST00000487169 HHIPL1Q96JK4 782 aa12.75□□□□□ -0.37
HDLBP-241ENST00000487169 DKKL1Q9UK85 242 aa12.75□□□□□ -0.37
HDLBP-241ENST00000487169 TBC1D24Q9ULP9 559 aa12.75□□□□□ -0.37
HDLBP-241ENST00000487169 PCDHGB5Q9Y5G0 923 aa12.75□□□□□ -0.37
HDLBP-241ENST00000487169 A0A1W2PPW3 197 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 HYKKA2RU49 373 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 SOX30O94993 753 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 AK4P27144 223 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-241ENST00000487169 TCTE1Q5JU00 501 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 ALG1LQ6GMV1 187 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 SLC36A4Q6YBV0 504 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 TMEM173Q86WV6 379 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-241ENST00000487169 OR2T33Q8NG76 320 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 PNPLA2Q96AD5 504 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 TMEM19Q96HH6 336 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 HSPA12BQ96MM6 686 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 TREX1Q9NSU2 369 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 LAMP5Q9UJQ1 280 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 DOCK2Q92608 1830 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 PRAMEF33A0A0G2JMD5 474 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 WASHC1A8K0Z3 465 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 SCAMP2O15127 329 aaKnown RBP12.74□□□□□ -0.37
HDLBP-241ENST00000487169 PRAMEF10O60809 474 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 ENTPD6O75354 484 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 MT-ND5P03915 603 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 ITGA5P08648 1049 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 PGAM2P15259 253 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 CCR7P32248 378 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 GJA4P35212 333 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 SLC15A1P46059 708 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 CLCN2P51788 898 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 FOXA1P55317 472 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 EXOC3L2Q2M3D2 409 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 CDKL4Q5MAI5 379 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 C6orf141Q5SZD1 244 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 MEDAGQ5VYS4 303 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 KANK2Q63ZY3 851 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 ZNF773Q6PK81 442 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 WASH2PQ6VEQ5 465 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 ARMC10Q8N2F6 343 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 CCDC54Q8NEL0 328 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 GNPDA2Q8TDQ7 276 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 MAL2Q969L2 176 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 NEIL2Q969S2 332 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 TMEM80Q96HE8 168 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 FEVQ99581 238 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 DNMT3BQ9UBC3 853 aaKnown RBP12.74□□□□□ -0.37
HDLBP-241ENST00000487169 UPB1Q9UBR1 384 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 A0A0X1KG70 313 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 SLC35F4A4IF30 521 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 PPP6CO00743 305 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 KLKB1P03952 638 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 HOXD9P28356 352 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-241ENST00000487169 P2RY2P41231 377 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 SOX2P48431 317 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 ZNF140P52738 457 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-241ENST00000487169 DCDC1P59894 354 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 PITPNAQ00169 270 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 CTC1Q2NKJ3 1217 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 FOXB2Q5VYV0 432 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 XKR5Q6UX68 686 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 OR8J1Q8NGP2 316 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 PMM1Q92871 262 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 ECHDC3Q96DC8 303 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 HHIPQ96QV1 700 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 LIN28AQ9H9Z2 209 aaKnown RBP12.74□□□□□ -0.37
HDLBP-241ENST00000487169 SARDHQ9UL12 918 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 NOX1Q9Y5S8 564 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 COL16A1Q07092 1604 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-241ENST00000487169 FAAHO00519 579 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 NME4O00746 187 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 HTR1AP08908 422 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 DHRS4L1P0CG22 281 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 GSTT2BP0CG30 244 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 COQ5Q5HYK3 327 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 GAREM2Q75VX8 874 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 DPPA4Q7L190 304 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 B3GAT2Q9NPZ5 323 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 HEBP1Q9NRV9 189 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 HSFX1Q9UBD0 423 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 RNF6Q9Y252 685 aa12.74□□□□□ -0.37
HDLBP-241ENST00000487169 ANTXRLA6NF34 631 aa12.73□□□□□ -0.37
HDLBP-241ENST00000487169 PRAMEF26H0Y7S4 382 aa12.73□□□□□ -0.37
HDLBP-241ENST00000487169 PPM1BO75688 479 aa12.73□□□□□ -0.37
HDLBP-241ENST00000487169 MRPL3P09001 348 aaKnown RBP12.73□□□□□ -0.37
HDLBP-241ENST00000487169 SLC2A2P11168 524 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-241ENST00000487169 PSKH1P11801 424 aa12.73□□□□□ -0.37
HDLBP-241ENST00000487169 ENDOUP21128 410 aaKnown RBP12.73□□□□□ -0.37
HDLBP-241ENST00000487169 F8A1P23610 371 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms