RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 H3BMM5 538 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 HSF2BPO75031 334 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 CABYRO75952 493 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 PPP1R3DO95685 299 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 PGK1P00558 417 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 ALPLP05186 524 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 IGKV2-30P06310 120 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 TPM3P06753 285 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 ASGR1P07306 291 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 ZNF286BP0CG31 522 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 SMIM10L2AP0DMW4 78 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 SMIM10L2BP0DMW5 78 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 FGF5P12034 268 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 NR1D1P20393 614 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 EFNA1P20827 205 aaPredicted RBP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 AHCYP23526 432 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 CALRP27797 417 aaKnown RBP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 TMOD1P28289 359 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 ALDH4A1P30038 563 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 DUTP33316 252 aaKnown RBP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 CETN2P41208 172 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 RABIFP47224 123 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 GLIPR1P48060 266 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 POLR2FP61218 127 aaKnown RBP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 LAMTOR4Q0VGL1 99 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 DRP2Q13474 957 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 TRA2AQ13595 282 aaKnown RBP eCLIP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 PDE7AQ13946 482 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 TFDP1Q14186 410 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 OPCMLQ14982 345 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 KRT31Q15323 416 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 TAF13Q15543 124 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 HSP90AA4PQ58FG1 418 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 ZNF542PQ5EBM4 170 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 TOR1AIP1Q5JTV8 583 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 AGAP6Q5VW22 663 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 C16orf82Q7Z2V1 217 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 GPR141Q7Z602 305 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 TDHQ8IZJ6 230 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 THEM5Q8N1Q8 247 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 HDDC3Q8N4P3 179 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 LRTM2Q8N967 370 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 ZNF383Q8NA42 475 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 KLHDC9Q8NEP7 349 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 OR13A1Q8NGR1 328 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 METTL21AQ8WXB1 218 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 RBM41Q96IZ5 413 aaKnown RBP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 CNOT6LQ96LI5 555 aaKnown RBP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 DDX50Q9BQ39 737 aaKnown RBP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 TUBGCP2Q9BSJ2 902 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 MTG1Q9BT17 334 aaPredicted RBP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 ALKBH7Q9BT30 221 aaPredicted RBP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 C1QTNF4Q9BXJ3 329 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 NFKBIZQ9BYH8 718 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 OR2B2Q9GZK3 357 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 TFB2MQ9H5Q4 396 aaKnown RBP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 EVA1AQ9H8M9 152 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 AGPAT3Q9NRZ7 376 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 GPR173Q9NS66 373 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 ZCCHC3Q9NUD5 404 aaKnown RBP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 TRMT6Q9UJA5 497 aaKnown RBP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 PIN4Q9Y237 131 aaKnown RBP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 NCKAP1Q9Y2A7 1128 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 STYXL1Q9Y6J8 313 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 PHLPP2Q6ZVD8 1323 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 ADGRA3Q8IWK6 1321 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 IGLV9-49A0A0B4J1Y8 123 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 LRRIQ4A6NIV6 560 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 LACTBL1A8MY62 500 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 ANKRD63C9JTQ0 380 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 ZNF197O14709 1029 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 FPGTO14772 594 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 MAPK13O15264 365 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 TXNL1O43396 289 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 PIGRP01833 764 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 TPM2P07951 284 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 IGHV4-31P0DP07 118 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 UGT1A6P19224 532 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 ADSSP30520 456 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 HPDP32754 393 aaPredicted RBP3.63□□□□□ -1.83
PTCD3-216ENST00000487043 MTIF2P46199 727 aaKnown RBP3.63□□□□□ -1.83
PTCD3-216ENST00000487043 NR2C2P49116 596 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 CASP4P49662 377 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 NR0B1P51843 470 aaKnown RBP3.63□□□□□ -1.83
PTCD3-216ENST00000487043 ART1P52961 327 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 ACLYP53396 1101 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 GAS1P54826 345 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 LCP2Q13094 533 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 MAPK6Q16659 721 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 GPR33Q49SQ1 333 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 CCDC40Q4G0X9 1142 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 SLC25A53Q5H9E4 307 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 C9orf57Q5W0N0 161 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 SPECC1LQ69YQ0 1117 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 PRSS57Q6UWY2 283 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 CXCL17Q6UXB2 119 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 MFSD7Q6UXD7 560 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 ISLR2Q6UXK2 745 aa3.63□□□□□ -1.83
PTCD3-216ENST00000487043 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.63□□□□□ -1.83
PTCD3-216ENST00000487043 PRUNE1Q86TP1 453 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms