RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 PEX1O43933 1283 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 CDH16O75309 829 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 ULK1O75385 1050 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 SUPT7LO94864 414 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 PDYNP01213 254 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 KRT6AP02538 564 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 KRT6BP04259 564 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 CRHR1P34998 444 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 CA7P43166 264 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 GSTM5P46439 218 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 KRT6CP48668 564 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 HK2P52789 917 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 CDH13P55290 713 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 SLC37A1P57057 533 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 PLIN5Q00G26 463 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 SLC18A2Q05940 514 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 MAP4K2Q12851 820 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 CSTF3Q12996 717 aaKnown RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 ART3Q13508 389 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 DDX39BQ13838 428 aaKnown RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 HYAL4Q2M3T9 481 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 ZNF791Q3KP31 576 aaPredicted RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 TTC19Q6DKK2 380 aaPredicted RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 OR52E8Q6IFG1 317 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 LETMD1Q6P1Q0 360 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 GALNT18Q6P9A2 607 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 CYP20A1Q6UW02 462 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 MAMDC2Q7Z304 686 aaPredicted RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 MDGA2Q7Z553 956 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 CLNKQ7Z7G1 428 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 MYLK4Q86YV6 388 aaPredicted RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 SPPL2CQ8IUH8 684 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 CHERPQ8IWX8 916 aaKnown RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 CYP4Z2PQ8N1L4 340 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 GHDCQ8N2G8 530 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 C17orf47Q8NEP4 570 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 OR4K14Q8NGD5 310 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 TM4SF18Q96CE8 201 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 MTFMTQ96DP5 389 aaKnown RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 FBXL20Q96IG2 436 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 METTL2AQ96IZ6 378 aaKnown RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 CDK15Q96Q40 435 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 HES7Q9BYE0 225 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 SHCBP1LQ9BZQ2 653 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 ROPN1BQ9BZX4 212 aaPredicted RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 ELOVL6Q9H5J4 265 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 ROPN1Q9HAT0 212 aaPredicted RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 SH2D2AQ9NP31 389 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 TIMMDC1Q9NPL8 285 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 SEMA4BQ9NPR2 832 aaPredicted RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 HPF1Q9NWY4 346 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 ANKRD10Q9NXR5 420 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 VPS29Q9UBQ0 182 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 COPS7AQ9UBW8 275 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 PSME2Q9UL46 239 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 WBP11Q9Y2W2 641 aaKnown RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 PCDHA9Q9Y5H5 950 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 NUP214P35658 2090 aaPredicted RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 A0A1B0GVC2 190 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 A0A1W2PPM1 405 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 ANKRD33BA6NCL7 494 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 WASHC1A8K0Z3 465 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 NPIPB8E9PQR5 432 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 G3V2L1 256 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 SLC19A2O60779 497 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 GLRA3O75311 464 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 SH3BGRLO75368 114 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 BCAS2O75934 225 aaPredicted RBP6.48□□□□□ -1.37
VPS50-218ENST00000485994 OR2J2O76002 312 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 WISP2O76076 250 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 OR4F21O95013 312 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 UNC5CO95185 931 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 ESRRBO95718 433 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 AIFM1O95831 613 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 CLDN1O95832 211 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 ENO1P06733 434 aaKnown RBP6.48□□□□□ -1.37
VPS50-218ENST00000485994 KLK1P06870 262 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 RNF224P0DH78 156 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 NR2F6P10588 404 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 DRD2P14416 443 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 PORP16435 677 aaPredicted RBP6.48□□□□□ -1.37
VPS50-218ENST00000485994 NAGAP17050 411 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 S1PR1P21453 382 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 PIK3R1P27986 724 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 XKP51811 444 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 CASP6P55212 293 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 KCNK10P57789 538 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 GALNT1Q10472 559 aaPredicted RBP6.48□□□□□ -1.37
VPS50-218ENST00000485994 CEBPEQ15744 281 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 TEX35Q5T0J7 233 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 CCNYL2Q5T2Q4 361 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 NDUFAF5Q5TEU4 345 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 SLC48A1Q6P1K1 146 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 WDR93Q6P2C0 686 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 XKRXQ6PP77 449 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 PAOXQ6QHF9 649 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 IL20RBQ6UXL0 311 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 RPTNQ6XPR3 784 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 RTL4Q6ZR62 310 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 RNF165Q6ZSG1 346 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms