RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 IL3P08700 152 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 PLA2G2AP14555 144 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 PORP16435 677 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-213ENST00000485080 BTKQ06187 659 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 CEBPEQ15744 281 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 FAM71E1Q6IPT2 247 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 DGAT2L6Q6ZPD8 337 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 PRICKLE2Q7Z3G6 844 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 BEST3Q8N1M1 668 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 RIT1Q92963 219 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 PPWD1Q96BP3 646 aaKnown RBP16.54■□□□□ 0.24
SREBF1-213ENST00000485080 ZNF764Q96H86 408 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-213ENST00000485080 ATP6V1G3Q96LB4 118 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 SORT1Q99523 831 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 OR8D2Q9GZM6 311 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 ILKAPQ9H0C8 392 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-213ENST00000485080 CDCP1Q9H5V8 836 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 SLAMF7Q9NQ25 335 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.54■□□□□ 0.24
SREBF1-213ENST00000485080 NKIRAS1Q9NYS0 192 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 PLA2G3Q9NZ20 509 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 COPS7AQ9UBW8 275 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 PTGDR2Q9Y5Y4 395 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 FLNCQ14315 2725 aa16.54■□□□□ 0.24
SREBF1-213ENST00000485080 POLEQ07864 2286 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 PIP5K1BO14986 540 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 ITM2AO43736 263 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 MAN1A2O60476 641 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 SEC22BO75396 215 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 LINC00032P0C843 101 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 CSNK2A2P19784 350 aaPredicted RBP16.53■□□□□ 0.24
SREBF1-213ENST00000485080 DDCP20711 480 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 BGNP21810 368 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 SLC1A6P48664 564 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 FUT7Q11130 342 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 STX3Q13277 289 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 TUBA3CQ13748 450 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 FCRLBQ6BAA4 426 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 TUBA3EQ6PEY2 450 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 MMP21Q8N119 569 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 ANKRD42Q8N9B4 389 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 OR5L2Q8NGL0 311 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 NUBPLQ8TB37 319 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 PPP3R2Q96LZ3 170 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 BARD1Q99728 777 aaKnown RBP16.53■□□□□ 0.24
SREBF1-213ENST00000485080 C20orf27Q9GZN8 174 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 MYOTQ9UBF9 498 aa16.53■□□□□ 0.24
SREBF1-213ENST00000485080 RELNP78509 3460 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 OR6C76A6NM76 312 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 TTLL8A6PVC2 850 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 GABRR3A8MPY1 467 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 FCHO1O14526 889 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 LYPLA1O75608 230 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-213ENST00000485080 RNF4P78317 190 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 TLE1Q04724 770 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 BST1Q10588 318 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 MAP4K2Q12851 820 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 NR6A1Q15406 480 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 INAQ16352 499 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 RFTN2Q52LD8 501 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-213ENST00000485080 TRIM42Q8IWZ5 723 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 DDIASQ8IXT1 998 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 HORMAD2Q8N7B1 307 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 ZNF321PQ8N8H1 164 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 MDS2Q8NDY4 140 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 CATSPER1Q8NEC5 780 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 CTHRC1Q96CG8 243 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 KLHL29Q96CT2 875 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 CNRIP1Q96F85 164 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-213ENST00000485080 UTP23Q9BRU9 249 aaKnown RBP16.52■□□□□ 0.24
SREBF1-213ENST00000485080 EBPLQ9BY08 206 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 UTS2RQ9UKP6 389 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 YARS2Q9Y2Z4 477 aaKnown RBP16.52■□□□□ 0.24
SREBF1-213ENST00000485080 FIS1Q9Y3D6 152 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 POLR3HQ9Y535 204 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-213ENST00000485080 ZNF780BQ9Y6R6 833 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 SHANK1Q9Y566 2161 aa16.52■□□□□ 0.24
SREBF1-213ENST00000485080 A0A1W2PS29 197 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 HMGB1P1B2RPK0 211 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-213ENST00000485080 KLF11O14901 512 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 PRKNO60260 465 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-213ENST00000485080 TBX19O60806 448 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 PRAMEF2O60811 474 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 SNNO75324 88 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-213ENST00000485080 CD96P40200 585 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 HLCSP50747 726 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 RPL14P50914 215 aaKnown RBP16.51■□□□□ 0.23
SREBF1-213ENST00000485080 SLC37A1P57057 533 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 MGAT2Q10469 447 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 MPEG1Q2M385 716 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 SMU1Q2TAY7 513 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 TTMPQ5BVD1 217 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 GALNT12Q8IXK2 581 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 GPALPP1Q8IXQ4 340 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 LRRC25Q8N386 305 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-213ENST00000485080 ZNF781Q8N8C0 355 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 OR7G1Q8NGA0 311 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 ZNF675Q8TD23 568 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 ERP27Q96DN0 273 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 PAIP2Q9BPZ3 127 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms