RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 PHF21BQ96EK2 531 aa19.89■□□□□ 0.77
USP40-215ENST00000484528 NOL11Q9H8H0 719 aaKnown RBP19.89■□□□□ 0.77
USP40-215ENST00000484528 ITGB1BP2Q9UKP3 347 aa19.89■□□□□ 0.77
USP40-215ENST00000484528 A0A1W2PS29 197 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 CCDC189A1A4V9 331 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 OR7A17O14581 309 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 UGDHO60701 494 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 IGHG3P01860 377 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 CHRNB4P30926 498 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 KCNJ2P63252 427 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 TLE4Q04727 773 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 ADGRD1Q6QNK2 874 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 RNF111Q6ZNA4 994 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 SLC29A4Q7RTT9 530 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 L3MBTL4Q8NA19 623 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 ACBD4Q8NC06 268 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 ATP6V1E2Q96A05 226 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 C16orf45Q96MC5 204 aaPredicted RBP19.88■□□□□ 0.77
USP40-215ENST00000484528 NSUN5Q96P11 429 aaKnown RBP19.88■□□□□ 0.77
USP40-215ENST00000484528 CDC42EP4Q9H3Q1 356 aaKnown RBP19.88■□□□□ 0.77
USP40-215ENST00000484528 DDX31Q9H8H2 851 aaKnown RBP19.88■□□□□ 0.77
USP40-215ENST00000484528 NPDC1Q9NQX5 325 aaPredicted RBP19.88■□□□□ 0.77
USP40-215ENST00000484528 TEX10Q9NXF1 929 aaPredicted RBP19.88■□□□□ 0.77
USP40-215ENST00000484528 TNPO3Q9Y5L0 923 aaKnown RBP19.88■□□□□ 0.77
USP40-215ENST00000484528 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.88■□□□□ 0.77
USP40-215ENST00000484528 CELSR1Q9NYQ6 3014 aa19.88■□□□□ 0.77
USP40-215ENST00000484528 IQANK1A0A1B0GTG1 560 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 URI1O94763 535 aaPredicted RBP19.87■□□□□ 0.77
USP40-215ENST00000484528 CLDN9O95484 217 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 POU3F2P20265 443 aaPredicted RBP19.87■□□□□ 0.77
USP40-215ENST00000484528 ACVR2AP27037 513 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 MAN2A2P49641 1150 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 ARFIP1P53367 373 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 CUL3Q13618 768 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 SPRED3Q2MJR0 410 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 SLC22A10Q63ZE4 541 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 C7orf57Q8NEG2 295 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 OR10G3Q8NGC4 313 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 LILRB4Q8NHJ6 448 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 RIT1Q92963 219 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 PELOQ9BRX2 385 aaKnown RBP19.87■□□□□ 0.77
USP40-215ENST00000484528 WWTR1Q9GZV5 400 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 LDAHQ9H6V9 325 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 EXO5Q9H790 373 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 WDR41Q9HAD4 459 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 SH2D2AQ9NP31 389 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.87■□□□□ 0.77
USP40-215ENST00000484528 XPR1Q9UBH6 696 aa19.87■□□□□ 0.77
USP40-215ENST00000484528 MTRF1LQ9UGC7 380 aaKnown RBP19.87■□□□□ 0.77
USP40-215ENST00000484528 FIGNL2A6NMB9 653 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 BCKDKO14874 412 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 CLPSP04118 112 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 INHBAP08476 426 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 SSTR4P31391 388 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 CCNG1P51959 295 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 SLC37A1P57057 533 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 BIKQ13323 160 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 EBPQ15125 230 aaKnown RBP19.86■□□□□ 0.77
USP40-215ENST00000484528 FAM219BQ5XKK7 198 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 TMEM64Q6YI46 380 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 RPS27LQ71UM5 84 aaKnown RBP19.86■□□□□ 0.77
USP40-215ENST00000484528 OR10Q1Q8NGQ4 319 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 UHMK1Q8TAS1 419 aaKnown RBP19.86■□□□□ 0.77
USP40-215ENST00000484528 PAQR8Q8TEZ7 354 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 SLC44A1Q8WWI5 657 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 C14orf79Q96F83 325 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 PAFAH2Q99487 392 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 DMGDHQ9UI17 866 aaKnown RBP19.86■□□□□ 0.77
USP40-215ENST00000484528 PCTPQ9UKL6 214 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 ACAD8Q9UKU7 415 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 FAM215AQ9Y5M1 114 aa19.86■□□□□ 0.77
USP40-215ENST00000484528 A0A1B0GVC2 190 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 OR14I1A6ND48 311 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 FOXE1O00358 373 aaPredicted RBP19.85■□□□□ 0.77
USP40-215ENST00000484528 AQP7O14520 342 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 PGRMC2O15173 223 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 TOXO94900 526 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 RFPL3SP0C7P2 107 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 MAGEA12P43365 314 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 TFF3Q07654 80 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 TRAF3Q13114 568 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 SLC10A1Q14973 349 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 HYAL4Q2M3T9 481 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 SGO1Q5FBB7 561 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 TTC19Q6DKK2 380 aaPredicted RBP19.85■□□□□ 0.77
USP40-215ENST00000484528 OR52E8Q6IFG1 317 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 ACAD11Q709F0 780 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 FBXW8Q8N3Y1 598 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 IFT81Q8WYA0 676 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 JSRP1Q96MG2 331 aaPredicted RBP19.85■□□□□ 0.77
USP40-215ENST00000484528 SERPINI1Q99574 410 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 TREX2Q9BQ50 279 aaPredicted RBP19.85■□□□□ 0.77
USP40-215ENST00000484528 MRPL1Q9BYD6 325 aaKnown RBP19.85■□□□□ 0.77
USP40-215ENST00000484528 ZNF703Q9H7S9 590 aaPredicted RBP19.85■□□□□ 0.77
USP40-215ENST00000484528 PROK2Q9HC23 129 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 ZBTB26Q9HCK0 441 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 KCNJ16Q9NPI9 418 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 SPRR3Q9UBC9 169 aa19.85■□□□□ 0.77
USP40-215ENST00000484528 TRGV5A0A0B4J1U4 118 aa19.84■□□□□ 0.77
USP40-215ENST00000484528 LRRC3CA6NJW4 275 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms