RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SSTR4P31391 388 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 CRHR1P34998 444 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 CCT5P48643 541 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 ALDH9A1P49189 494 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 NAGLUP54802 743 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 HMGCS1Q01581 520 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 BTKQ06187 659 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 IFFO1Q0D2I5 559 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 ERCC6LQ2NKX8 1250 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 CCDC153Q494R4 210 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 FAM180BQ6P0A1 224 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 RNF111Q6ZNA4 994 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 PSD4Q8NDX1 1056 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 RIT1Q92963 219 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 ZBTB9Q96C00 473 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 FBXL20Q96IG2 436 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 ART5Q96L15 291 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 PELOQ9BRX2 385 aaKnown RBP11.38□□□□□ -0.59
MSH5-216ENST00000484309 EBPLQ9BY08 206 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 ACPTQ9BZG2 426 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 DEPPQ9NTK1 212 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 VPS29Q9UBQ0 182 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 GRID1Q9ULK0 1009 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 KLF13Q9Y2Y9 288 aaPredicted RBP11.38□□□□□ -0.59
MSH5-216ENST00000484309 PINLYPA6NC86 204 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 SPAG7O75391 227 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 ERAL1O75616 437 aaKnown RBP11.37□□□□□ -0.59
MSH5-216ENST00000484309 ESRRBO95718 433 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 CLPSP04118 112 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 ENO1P06733 434 aaKnown RBP11.37□□□□□ -0.59
MSH5-216ENST00000484309 NUDT17P0C025 328 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 SLC35E2P0CK97 266 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 GP1BBP13224 206 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 CPA3P15088 417 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 NT5EP21589 574 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 SERPINB3P29508 390 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 XKP51811 444 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 PKNOX1P55347 436 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 SLC18A2Q05940 514 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 CSTF3Q12996 717 aaKnown RBP11.37□□□□□ -0.59
MSH5-216ENST00000484309 SPRED3Q2MJR0 410 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 CFAP157Q5JU67 520 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 FRMD7Q6ZUT3 714 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 SIAH3Q8IW03 269 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 OR4K14Q8NGD5 310 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 OR5L2Q8NGL0 311 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 OR8K3Q8NH51 312 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 TM4SF18Q96CE8 201 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 KLHL29Q96CT2 875 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 CCDC126Q96EE4 140 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 APIPQ96GX9 242 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 GPR137Q96N19 417 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 TNFRSF12AQ9NP84 129 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 TIMMDC1Q9NPL8 285 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 NMRK1Q9NWW6 199 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 PLEKHB1Q9UF11 243 aaPredicted RBP11.37□□□□□ -0.59
MSH5-216ENST00000484309 STK38LQ9Y2H1 464 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 PCDHA9Q9Y5H5 950 aa11.37□□□□□ -0.59
MSH5-216ENST00000484309 NCOA6Q14686 2063 aaPredicted RBP11.36□□□□□ -0.59
MSH5-216ENST00000484309 GNG14A0A1W2PPG7 69 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 C1orf226A1L170 272 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 FAM166BA8MTA8 275 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 ESPNB1AK53 854 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 KLRC4-KLRK1H3BQV0 150 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 CDK2AP1O14519 115 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 TFECO14948 347 aaPredicted RBP11.36□□□□□ -0.59
MSH5-216ENST00000484309 HS6ST1O60243 411 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 PCDH7O60245 1069 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 CDC40O60508 579 aaKnown RBP eCLIP11.36□□□□□ -0.59
MSH5-216ENST00000484309 ZG16O60844 167 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 CRCPO75575 148 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 LRATO95237 230 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 NADKO95544 446 aaPredicted RBP11.36□□□□□ -0.59
MSH5-216ENST00000484309 CLDN1O95832 211 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 IL3P08700 152 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 STSP08842 583 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 HSD3B1P14060 373 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 CPMP14384 443 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 HSD3B2P26439 372 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 COL8A1P27658 744 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 DEKP35659 375 aaKnown RBP11.36□□□□□ -0.59
MSH5-216ENST00000484309 FEN1P39748 380 aaKnown RBP11.36□□□□□ -0.59
MSH5-216ENST00000484309 NR0B1P51843 470 aaKnown RBP11.36□□□□□ -0.59
MSH5-216ENST00000484309 SLC37A1P57057 533 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 RAE1P78406 368 aaKnown RBP11.36□□□□□ -0.59
MSH5-216ENST00000484309 DUSP2Q05923 314 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 RBPJQ06330 500 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 BIKQ13323 160 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 PCLAFQ15004 111 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 SLC48A1Q6P1K1 146 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 WDR93Q6P2C0 686 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 EMBQ6PCB8 327 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 TMEM64Q6YI46 380 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 SLC29A4Q7RTT9 530 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 TRABD2AQ86V40 505 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 C10orf107Q8IVU9 208 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 GALNT12Q8IXK2 581 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 SRRM1Q8IYB3 904 aaKnown RBP11.36□□□□□ -0.59
MSH5-216ENST00000484309 CNPY4Q8N129 248 aa11.36□□□□□ -0.59
MSH5-216ENST00000484309 CDC26Q8NHZ8 85 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms