RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TNFRSF17Q02223 184 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 STX4Q12846 297 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 PCLAFQ15004 111 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 ELAVL1Q15717 326 aaKnown RBP9.31□□□□□ -0.92
CPSF4-213ENST00000484112 MAPKAPK3Q16644 382 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 SPIN4Q56A73 249 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 PAPD4Q6PIY7 484 aaKnown RBP9.31□□□□□ -0.92
CPSF4-213ENST00000484112 Q6ZPB1 254 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-213ENST00000484112 DOLPP1Q86YN1 238 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 C10orf107Q8IVU9 208 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 GHDCQ8N2G8 530 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 TMEM132CQ8N3T6 1108 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 CDYL2Q8N8U2 506 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 TMEM178AQ8NBL3 297 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 FAM98AQ8NCA5 519 aaKnown RBP9.31□□□□□ -0.92
CPSF4-213ENST00000484112 MDS2Q8NDY4 140 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 OR14A16Q8NHC5 309 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 DAZLQ92904 295 aaKnown RBP9.31□□□□□ -0.92
CPSF4-213ENST00000484112 FAM111AQ96PZ2 611 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 MAPKAP1Q9BPZ7 522 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 RBCK1Q9BYM8 510 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 RPF2Q9H7B2 306 aaKnown RBP9.31□□□□□ -0.92
CPSF4-213ENST00000484112 MID1IP1Q9NPA3 183 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 ADAP2Q9NPF8 381 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 ARGLU1Q9NWB6 273 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-213ENST00000484112 SIRT5Q9NXA8 310 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 VTI1BQ9UEU0 232 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 SLC12A4Q9UP95 1085 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 WBP11Q9Y2W2 641 aaKnown RBP9.31□□□□□ -0.92
CPSF4-213ENST00000484112 CSMD2Q7Z408 3487 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 SCN3AQ9NY46 2000 aa9.31□□□□□ -0.92
CPSF4-213ENST00000484112 MED13LQ71F56 2210 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 A0A1B0GTL3 188 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 ASPDHA6ND91 283 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 GABRR3A8MPY1 467 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 FOXO6A8MYZ6 492 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 SAP18O00422 153 aaKnown RBP9.3□□□□□ -0.92
CPSF4-213ENST00000484112 RTCAO00442 366 aaKnown RBP9.3□□□□□ -0.92
CPSF4-213ENST00000484112 PPP6CO00743 305 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 PRRG2O14669 202 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 BIRC5O15392 142 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 DYRK3O43781 588 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 CRCPO75575 148 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 ETHE1O95571 254 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 CHEK2O96017 543 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 SP1P08047 785 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 FGF4P08620 206 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 FAM58BPP0C7Q3 252 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 COX7A2P14406 83 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 MAOAP21397 527 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 PRPH2P23942 346 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 ETV4P43268 484 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 SLC26A5P58743 744 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 TBL3Q12788 808 aaKnown RBP9.3□□□□□ -0.92
CPSF4-213ENST00000484112 CCNYL2Q5T2Q4 361 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 OR52E8Q6IFG1 317 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 SLC25A25Q6KCM7 469 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 GALNT18Q6P9A2 607 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 RPS27LQ71UM5 84 aaKnown RBP9.3□□□□□ -0.92
CPSF4-213ENST00000484112 TRIM46Q7Z4K8 759 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 EXOC3L1Q86VI1 746 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 ARMC10Q8N2F6 343 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 SLC5A8Q8N695 610 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 FAM47BQ8NA70 645 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 MORN4Q8NDC4 146 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 B3GNT7Q8NFL0 401 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 FAM76AQ8TAV0 307 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 ELP5Q8TE02 316 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 TSLPQ969D9 159 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 SCMH1Q96GD3 660 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 ART5Q96L15 291 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 FRMD6Q96NE9 622 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 CSF3RQ99062 836 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 NPAS2Q99743 824 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 CCT7Q99832 543 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 ENKD1Q9H0I2 346 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 CDCP1Q9H5V8 836 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 NECTIN3Q9NQS3 549 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 COQ3Q9NZJ6 369 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 LRFN1Q9P244 771 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 MCM8Q9UJA3 840 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 ASB4Q9Y574 426 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 PCDHGB6Q9Y5F9 930 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 CLDN16Q9Y5I7 305 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 CPAMD8Q8IZJ3 1885 aa9.3□□□□□ -0.92
CPSF4-213ENST00000484112 C1orf226A1L170 272 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 E9PLN8 166 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 UBFD1O14562 309 aaKnown RBP9.29□□□□□ -0.92
CPSF4-213ENST00000484112 TMPRSS11DO60235 418 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 EEDO75530 441 aaKnown RBP9.29□□□□□ -0.92
CPSF4-213ENST00000484112 RSL1D1O76021 490 aaKnown RBP9.29□□□□□ -0.92
CPSF4-213ENST00000484112 BPGMP07738 259 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 NR2F6P10588 404 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 ZNF24P17028 368 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 TSPAN8P19075 237 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 TPP2P29144 1249 aaPredicted RBP9.29□□□□□ -0.92
CPSF4-213ENST00000484112 ALDH3A1P30838 453 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 STT3AP46977 705 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 CLCN2P51788 898 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 ART1P52961 327 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms