RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 DLSTP36957 453 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 STAT5AP42229 794 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 POLE2P56282 527 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 HSD11B2P80365 405 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 C2orf80Q0P641 193 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 ABHD18Q0P651 414 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 HEPACAMQ14CZ8 416 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 SF1Q15637 639 aaKnown RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 UGT8Q16880 541 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 LRRC36Q1X8D7 754 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 LINC00303Q3SY05 128 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 FAM98BQ52LJ0 330 aaKnown RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 CCNYL2Q5T2Q4 361 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 DEPDC1Q5TB30 811 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 OGFRL1Q5TC84 451 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 C1orf189Q5VU69 101 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 KHDRBS2Q5VWX1 349 aaKnown RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 LPCAT4Q643R3 524 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 OR4F3Q6IEY1 312 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 ERICH5Q6P6B1 374 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 KLHL35Q6PF15 583 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 ZNF621Q6ZSS3 439 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 COMMD6Q7Z4G1 85 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 CAMKMTQ7Z624 323 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 ANKRD46Q86W74 232 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 PPP1R3BQ86XI6 285 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 PDSS2Q86YH6 399 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 SHISA5Q8N114 240 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 D2HGDHQ8N465 521 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 METTL27Q8N6F8 245 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 C19orf47Q8N9M1 422 aaKnown RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 SRFBP1Q8NEF9 429 aaKnown RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 OR7A2PQ8NGA2 310 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 OR4K1Q8NGD4 311 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 OR10A6Q8NH74 314 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 CT55Q8WUE5 264 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 CANT1Q8WVQ1 401 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 ZFPM2Q8WW38 1151 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 EME1Q96AY2 570 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 PPCDCQ96CD2 204 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 C11orf24Q96F05 449 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 EGLN2Q96KS0 407 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 CCDC115Q96NT0 180 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 PRAP1Q96NZ9 151 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 BTBD9Q96Q07 612 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 SPATA9Q9BWV2 254 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 UGT2B28Q9BY64 529 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 ASPSCR1Q9BZE9 553 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 BHLHE41Q9C0J9 482 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 SPRTNQ9H040 489 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 PAIP1Q9H074 479 aaKnown RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 REEP4Q9H6H4 257 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 GPN2Q9H9Y4 310 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 MYNNQ9NPC7 610 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 MIEF1Q9NQG6 463 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 C8orf4Q9NR00 106 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 ZNF282Q9UDV7 671 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 ATP6V1HQ9UI12 483 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 BTNL2Q9UIR0 455 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 RARRES3Q9UL19 164 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 SNX7Q9UNH6 387 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 SH2B3Q9UQQ2 575 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 TMEM184BQ9Y519 407 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 PCDHB14Q9Y5E9 798 aa6.55□□□□□ -1.36
BRCA1-216ENST00000484087 GCN1Q92616 2671 aaKnown RBP6.55□□□□□ -1.36
BRCA1-216ENST00000484087 A0A1W2PPV9 198 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 TRBC2A0A5B9 178 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 SAP18O00422 153 aaKnown RBP6.54□□□□□ -1.36
BRCA1-216ENST00000484087 RNASET2O00584 256 aaKnown RBP6.54□□□□□ -1.36
BRCA1-216ENST00000484087 GUCY1B2O75343 617 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 CLEC3AO75596 197 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 MED26O95402 600 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 CPSF4O95639 269 aaKnown RBP6.54□□□□□ -1.36
BRCA1-216ENST00000484087 SERPIND1P05546 499 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 GSNP06396 782 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 KLK1P06870 262 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 GGT1P19440 569 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 VAMP1P23763 118 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 GABRA4P48169 554 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 MAPK12P53778 367 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 TRA2BP62995 288 aaKnown RBP6.54□□□□□ -1.36
BRCA1-216ENST00000484087 SNRPNP63162 240 aaKnown RBP6.54□□□□□ -1.36
BRCA1-216ENST00000484087 CSNK1G2P78368 415 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 RAE1P78406 368 aaKnown RBP6.54□□□□□ -1.36
BRCA1-216ENST00000484087 CHRNB3Q05901 458 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 KLC1Q07866 573 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 TGM3Q08188 693 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 CHAF1BQ13112 559 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 MED21Q13503 144 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 IL10RAQ13651 578 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 ERV3-1Q14264 604 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 FXNQ16595 210 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 TMEM35AQ53FP2 167 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 ADNP2Q6IQ32 1131 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 SERPINA11Q86U17 422 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 NUDT13Q86X67 352 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 MICU2Q8IYU8 434 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 AMER2Q8N7J2 671 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 EXD3Q8N9H8 876 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 ZNF740Q8NDX6 193 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms