RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TSC22D4Q9Y3Q8 395 aa16.6■□□□□ 0.25
ATG4B-221ENST00000483778 PCDHGA11Q9Y5H2 935 aa16.6■□□□□ 0.25
ATG4B-221ENST00000483778 MAP1AP78559 2803 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-221ENST00000483778 SETD2Q9BYW2 2564 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-221ENST00000483778 A0A0G2JNJ9 132 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 SYNDIG1LA6NDD5 238 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 LRRC3CA6NJW4 275 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 H0YIV9 168 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 FAM58BPP0C7Q3 252 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 COX7A2P14406 83 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 SLC37A1P57057 533 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 ACAP2Q15057 778 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 PCBP2Q15366 365 aaKnown RBP eCLIP16.59■□□□□ 0.252e-6■■■■□ 21.9
ATG4B-221ENST00000483778 FAM83EQ2M2I3 478 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 RPS27LQ71UM5 84 aaKnown RBP16.59■□□□□ 0.25
ATG4B-221ENST00000483778 L3MBTL4Q8NA19 623 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 OR10Q1Q8NGQ4 319 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 PAQR8Q8TEZ7 354 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 CHTF18Q8WVB6 975 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 NSUN5Q96P11 429 aaKnown RBP16.59■□□□□ 0.25
ATG4B-221ENST00000483778 KCNJ16Q9NPI9 418 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 MS4A12Q9NXJ0 267 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 NINJ2Q9NZG7 142 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 Q9UFV3 132 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 PHF11Q9UIL8 331 aa16.59■□□□□ 0.25
ATG4B-221ENST00000483778 CHCHD2Q9Y6H1 151 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-221ENST00000483778 A0A1B0GTL3 188 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 SYCE1LA8MT33 242 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 KDM4EB2RXH2 506 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-221ENST00000483778 AQP7O14520 342 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 AIFM1O95831 613 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 CT62P0C5K7 136 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 MSX1P28360 303 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 SSTR4P31391 388 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 MAN2A2P49641 1150 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 DLX5P56178 289 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 TECRLQ5HYJ1 363 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 DMRTC2Q8IXT2 367 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-221ENST00000483778 ST13P4Q8IZP2 240 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-221ENST00000483778 OR52B6Q8NGF0 335 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 SPACA9Q96E40 222 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-221ENST00000483778 GAL3ST4Q96RP7 486 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 WWTR1Q9GZV5 400 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 VPS11Q9H270 941 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 NOL11Q9H8H0 719 aaKnown RBP16.58■□□□□ 0.24
ATG4B-221ENST00000483778 ZBTB26Q9HCK0 441 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 TEX10Q9NXF1 929 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-221ENST00000483778 ALKBH4Q9NXW9 302 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 ACAD8Q9UKU7 415 aa16.58■□□□□ 0.24
ATG4B-221ENST00000483778 CNOT11Q9UKZ1 510 aaKnown RBP16.58■□□□□ 0.24
ATG4B-221ENST00000483778 C2CD3Q4AC94 2353 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 TRGV5A0A0B4J1U4 118 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 IQANK1A0A1B0GTG1 560 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 OR14I1A6ND48 311 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 PPP6CO00743 305 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 BCKDKO14874 412 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 SUSD5O60279 629 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 FBXO45P0C2W1 286 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 TYK2P29597 1187 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 TLX1P31314 330 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-221ENST00000483778 TRPC1P48995 793 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 PLIN5Q00G26 463 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 CUL3Q13618 768 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 SNTB1Q13884 538 aaKnown RBP16.57■□□□□ 0.24
ATG4B-221ENST00000483778 EBPQ15125 230 aaKnown RBP16.57■□□□□ 0.24
ATG4B-221ENST00000483778 BICRALQ6AI39 1079 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 RNF111Q6ZNA4 994 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 ACAD11Q709F0 780 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 CDH24Q86UP0 819 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 FAM13CQ8NE31 585 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 SLC22A8Q8TCC7 542 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 NRGNQ92686 78 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 RIT1Q92963 219 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 PHF21BQ96EK2 531 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 SLC6A15Q9H2J7 730 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 LDAHQ9H6V9 325 aa16.57■□□□□ 0.24
ATG4B-221ENST00000483778 HRNRQ86YZ3 2850 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-221ENST00000483778 PRRC2AP48634 2157 aaKnown RBP16.57■□□□□ 0.24
ATG4B-221ENST00000483778 FOXE1O00358 373 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-221ENST00000483778 OR10H2O60403 315 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 HOXD4P09016 255 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-221ENST00000483778 NR2F6P10588 404 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 CAPN3P20807 821 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 KCNJ2P63252 427 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 SPRED3Q2MJR0 410 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 CYP20A1Q6UW02 462 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 B3GNT6Q6ZMB0 384 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 SEM1Q6ZVN7 128 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 MMP21Q8N119 569 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 FBXW8Q8N3Y1 598 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 SLC15A4Q8N697 577 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 PTGR2Q8N8N7 351 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-221ENST00000483778 ZNF441Q8N8Z8 693 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 JSRP1Q96MG2 331 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-221ENST00000483778 DOCK7Q96N67 2140 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 ZNF703Q9H7S9 590 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-221ENST00000483778 CXorf21Q9HAI6 301 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 ZFP64Q9NPA5 681 aa16.56■□□□□ 0.24
ATG4B-221ENST00000483778 FARSBQ9NSD9 589 aaKnown RBP16.56■□□□□ 0.24
ATG4B-221ENST00000483778 LYARQ9NX58 379 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms