RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 RNF7Q9UBF6 113 aa6.21□□□□□ -1.42
CLK1-212ENST00000482590 KLQ9UEF7 1012 aa6.21□□□□□ -1.42
CLK1-212ENST00000482590 IL17BQ9UHF5 180 aa6.21□□□□□ -1.42
CLK1-212ENST00000482590 NOCTQ9UK39 431 aaKnown RBP6.21□□□□□ -1.42
CLK1-212ENST00000482590 DNPEPQ9ULA0 475 aa6.21□□□□□ -1.42
CLK1-212ENST00000482590 A4GNTQ9UNA3 340 aa6.21□□□□□ -1.42
CLK1-212ENST00000482590 SNX6Q9UNH7 406 aa6.21□□□□□ -1.42
CLK1-212ENST00000482590 SPTA1P02549 2419 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 TLN1Q9Y490 2541 aaKnown RBP6.2□□□□□ -1.42
CLK1-212ENST00000482590 FAM230AA0A1W2PPH8 454 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 C5orf51A6NDU8 294 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 CFAP73A6NFT4 308 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 WIPF3A6NGB9 483 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 DNAJC9-AS1A6NH13 148 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 C2CD4BA6NLJ0 364 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 D6RAR5 112 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 FAM72CH0Y354 149 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 TMX2-CTNND1H3BSU7 103 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 EBAG9O00559 213 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 MTX2O75431 263 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 GCATO75600 419 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 TNFSF15O95150 251 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 PIGNO95427 931 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 PCCBP05166 539 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 RPLP0P05388 317 aaKnown RBP6.2□□□□□ -1.42
CLK1-212ENST00000482590 PLEKP08567 350 aaPredicted RBP6.2□□□□□ -1.42
CLK1-212ENST00000482590 C8orf89P0DMQ9 161 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 MMP8P22894 467 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 PBX1P40424 430 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 PEX5P50542 639 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 SUOXP51687 545 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 PRRX1P54821 245 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 AIF1P55008 147 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 F2RL1P55085 397 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 GSCP56915 257 aaPredicted RBP6.2□□□□□ -1.42
CLK1-212ENST00000482590 FOXL2P58012 376 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 TPI1P60174 286 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 TIAL1Q01085 375 aaKnown RBP eCLIP6.2□□□□□ -1.42
CLK1-212ENST00000482590 ABRQ12979 859 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 OLIG2Q13516 323 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 LY6DQ14210 128 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 CEBPEQ15744 281 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 SNAPC1Q16533 368 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 SLC18A3Q16572 532 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 PARP15Q460N3 678 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 RAB6CQ53S08 254 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 RBM20Q5T481 1227 aaKnown RBP6.2□□□□□ -1.42
CLK1-212ENST00000482590 C1orf185Q5T7R7 199 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 FAM72AQ5TYM5 149 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 FAM90A2PQ658T7 463 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 RAET1GQ6H3X3 334 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 FAM72DQ6L9T8 149 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 ZNF529Q6P280 563 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 DNAJC24Q6P3W2 148 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 SCYL2Q6P3W7 929 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 CLEC2AQ6UVW9 174 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 ENPP7Q6UWV6 458 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 B3GNT6Q6ZMB0 384 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 TAOK1Q7L7X3 1001 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 ZNF551Q7Z340 670 aaPredicted RBP6.2□□□□□ -1.42
CLK1-212ENST00000482590 FAM72BQ86X60 149 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 BATF2Q8N1L9 274 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 FBXO39Q8N4B4 442 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 UXS1Q8NBZ7 420 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 OR10S1Q8NGN2 331 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 CFAP61Q8NHU2 1237 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 C9orf43Q8TAL5 461 aaPredicted RBP6.2□□□□□ -1.42
CLK1-212ENST00000482590 GPT2Q8TD30 523 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 SLC20A1Q8WUM9 679 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.2□□□□□ -1.42
CLK1-212ENST00000482590 GFM1Q96RP9 751 aaKnown RBP6.2□□□□□ -1.42
CLK1-212ENST00000482590 NAP1L3Q99457 506 aaPredicted RBP6.2□□□□□ -1.42
CLK1-212ENST00000482590 AIFM2Q9BRQ8 373 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 ZSCAN5AQ9BUG6 496 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 RAB33BQ9H082 229 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 RAB6CQ9H0N0 254 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 P2RY12Q9H244 342 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 GANQ9H2C0 597 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 FAM114A2Q9NRY5 505 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 FAM207AQ9NSI2 230 aaPredicted RBP6.2□□□□□ -1.42
CLK1-212ENST00000482590 SAMSN1Q9NSI8 373 aaKnown RBP6.2□□□□□ -1.42
CLK1-212ENST00000482590 PNPLA3Q9NST1 481 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.2□□□□□ -1.425e-6■□□□□ 10.5
CLK1-212ENST00000482590 DONSONQ9NYP3 566 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 ADAM22Q9P0K1 906 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 ATP6V1HQ9UI12 483 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 NEU3Q9UQ49 428 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 R3HDM2Q9Y2K5 976 aaKnown RBP6.2□□□□□ -1.42
CLK1-212ENST00000482590 CMAHPQ9Y471 501 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 HEMK1Q9Y5R4 338 aaPredicted RBP6.2□□□□□ -1.42
CLK1-212ENST00000482590 PTPN13Q12923 2485 aa6.2□□□□□ -1.42
CLK1-212ENST00000482590 MAST4O15021 2626 aa6.19□□□□□ -1.42
CLK1-212ENST00000482590 C5orf52A6NGY3 159 aa6.19□□□□□ -1.42
CLK1-212ENST00000482590 SDR42E2A6NKP2 422 aa6.19□□□□□ -1.42
CLK1-212ENST00000482590 K7ENP7 123 aa6.19□□□□□ -1.42
CLK1-212ENST00000482590 NTN3O00634 580 aaPredicted RBP6.19□□□□□ -1.42
CLK1-212ENST00000482590 YY2O15391 372 aa6.19□□□□□ -1.42
CLK1-212ENST00000482590 SLC28A2O43868 658 aa6.19□□□□□ -1.42
CLK1-212ENST00000482590 WDR47O94967 919 aa6.19□□□□□ -1.42
CLK1-212ENST00000482590 AGFG2O95081 481 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms