RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 C1QAP02745 245 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 CSTF2P33240 577 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 DCTP40126 519 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 AKIRIN2Q53H80 203 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 HMBOX1Q6NT76 420 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 TIGD4Q8IY51 512 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 MEIOBQ8N635 442 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 C9orf43Q8TAL5 461 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 FATE1Q969F0 183 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 CIDECQ96AQ7 238 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 TM9SF3Q9HD45 589 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 NEUROD4Q9HD90 331 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 PNO1Q9NRX1 252 aaKnown RBP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 EIF3KQ9UBQ5 218 aaKnown RBP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 CACNG3O60359 315 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 SLC25A12O75746 678 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 CKMT1AP12532 417 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 GABARAPL2P60520 117 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 SIM1P81133 766 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 SF3B4Q15427 424 aaKnown RBP eCLIP10.78□□□□□ -0.681e-6■■■■■ 73.8
SMPD4-218ENST00000482171 IKBIPQ70UQ0 350 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 CHCHD4Q8N4Q1 142 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 AQP11Q8NBQ7 271 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 SLC37A3Q8NCC5 494 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 NETO1Q8TDF5 533 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 GRHL3Q8TE85 626 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 WACQ9BTA9 647 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 CHIAQ9BZP6 476 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 ZBTB20Q9HC78 741 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 B3GNT3Q9Y2A9 372 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 FAM186AA6NE01 2351 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 TNS1Q9HBL0 1735 aaKnown RBP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 EIF3FO00303 357 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 UPK1BO75841 260 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 JUNDP17535 347 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 CSTF1Q05048 431 aaKnown RBP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 SELPLGQ14242 412 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 REEP3Q6NUK4 255 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 PNCKQ6P2M8 343 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 ABHD13Q7L211 337 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 CHDHQ8NE62 594 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 OR13F1Q8NGS4 319 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 MAELQ96JY0 434 aaKnown RBP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 TEX37Q96LM6 180 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 NTMT1Q9BV86 223 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 PRSS16Q9NQE7 514 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 TM7SF3Q9NS93 570 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 WBP1LQ9NX94 342 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 SARDHQ9UL12 918 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 IFT52Q9Y366 437 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 PLXNB2O15031 1838 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 H7C0S8 307 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 MPZL2O60487 215 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 SEMA4FO95754 770 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 H1F0P07305 194 aaKnown RBP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 SBK3P0C264 359 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 MAB21L1Q13394 359 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 IRF4Q15306 451 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 ZNF630Q2M218 657 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 GRHL2Q6ISB3 625 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 USP53Q70EK8 1073 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 FAM217AQ8IXS0 508 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 CADM3Q8N126 398 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 C16orf78Q8WTQ4 265 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 CRELD1Q96HD1 420 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 CAMK1GQ96NX5 476 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 MGLLQ99685 303 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 RDH14Q9HBH5 336 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 MS4A12Q9NXJ0 267 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 AKAP7Q9P0M2 348 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-218ENST00000482171 BAIAP2Q9UQB8 552 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 PCDHGB6Q9Y5F9 930 aa10.78□□□□□ -0.68
SMPD4-218ENST00000482171 GVINP1Q7Z2Y8 2422 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 A0A1B0GTL3 188 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 SCAMP2O15127 329 aaKnown RBP10.77□□□□□ -0.68
SMPD4-218ENST00000482171 PRMT3O60678 531 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 OR2B3O76000 313 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 HSD3B1P14060 373 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 ITGB8P26012 769 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 HSD3B2P26439 372 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 MLLT3P42568 568 aaPredicted RBP10.77□□□□□ -0.68
SMPD4-218ENST00000482171 XKP51811 444 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 RPL6Q02878 288 aaKnown RBP10.77□□□□□ -0.68
SMPD4-218ENST00000482171 NPRL3Q12980 569 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 NDUFAF6Q330K2 333 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 FUNDC1Q8IVP5 155 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 NAGSQ8N159 534 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 PIGXQ8TBF5 258 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 FAM3CQ92520 227 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 PDLIM5Q96HC4 596 aaKnown RBP10.77□□□□□ -0.68
SMPD4-218ENST00000482171 FCRL4Q96PJ5 515 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 UHRF1Q96T88 793 aaPredicted RBP10.77□□□□□ -0.68
SMPD4-218ENST00000482171 GINS4Q9BRT9 223 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 CUEDC1Q9NWM3 386 aaPredicted RBP10.77□□□□□ -0.68
SMPD4-218ENST00000482171 DNAJC27Q9NZQ0 273 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 CALML5Q9NZT1 146 aa10.77□□□□□ -0.68
SMPD4-218ENST00000482171 APOBEC3BQ9UH17 382 aaKnown RBP10.77□□□□□ -0.68
SMPD4-218ENST00000482171 PTTG1O95997 202 aa10.77□□□□□ -0.69
SMPD4-218ENST00000482171 MMP12P39900 470 aa10.77□□□□□ -0.69
SMPD4-218ENST00000482171 PRLHRP49683 370 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms