RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 RPAP3Q9H6T3 665 aaPredicted RBP4.7□□□□□ -1.66
COPA-203ENST00000481040 KAT8Q9H7Z6 458 aaKnown RBP4.7□□□□□ -1.66
COPA-203ENST00000481040 TRPV5Q9NQA5 729 aa4.7□□□□□ -1.66
COPA-203ENST00000481040 RNF14Q9UBS8 474 aa4.7□□□□□ -1.66
COPA-203ENST00000481040 PLCL2Q9UPR0 1127 aa4.7□□□□□ -1.66
COPA-203ENST00000481040 C2CD2Q9Y426 696 aa4.7□□□□□ -1.66
COPA-203ENST00000481040 A0A087WUV0 522 aaPredicted RBP4.69□□□□□ -1.66
COPA-203ENST00000481040 SHISA7A6NL88 538 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 E9PBE3 544 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 LMO7DNF2Z398 122 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 ZNF208O43345 1280 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 PRKNO60260 465 aaPredicted RBP4.69□□□□□ -1.66
COPA-203ENST00000481040 JAK2O60674 1132 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 CRYABP02511 175 aaKnown RBP4.69□□□□□ -1.66
COPA-203ENST00000481040 VTNP04004 478 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 UMODP07911 640 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 LYNP07948 512 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 IGHV4-38-2P0DP08 117 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 PDLIM4P50479 330 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 PPT1P50897 306 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 DVL1P1P54792 670 aaPredicted RBP4.69□□□□□ -1.66
COPA-203ENST00000481040 ATP5IP56385 69 aaPredicted RBP4.69□□□□□ -1.66
COPA-203ENST00000481040 BACE1P56817 501 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 RPS4XP62701 263 aaKnown RBP4.69□□□□□ -1.66
COPA-203ENST00000481040 HERVK_113P63132 956 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 ERVK-8P63133 956 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 CDKL1Q00532 357 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 KLF5Q13887 457 aaPredicted RBP4.69□□□□□ -1.66
COPA-203ENST00000481040 P2RY14Q15391 338 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 PARP6Q2NL67 630 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 TTC23Q5W5X9 447 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 CREB3L2Q70SY1 520 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 ASRGL1Q7L266 308 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 ITIH5Q86UX2 942 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 GPBP1Q86WP2 473 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 BBS5Q8N3I7 341 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 OR1L3Q8NH93 324 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 C8orf46Q8TAG6 207 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 TRMT10AQ8TBZ6 339 aaKnown RBP4.69□□□□□ -1.66
COPA-203ENST00000481040 RDH11Q8TC12 318 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 ATP8B4Q8TF62 1192 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 APOBEC4Q8WW27 367 aaKnown RBP4.69□□□□□ -1.66
COPA-203ENST00000481040 TMEM143Q96AN5 459 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 PIWIL1Q96J94 861 aaKnown RBP4.69□□□□□ -1.66
COPA-203ENST00000481040 UHRF2Q96PU4 802 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 PLIN2Q99541 437 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 DCTN5Q9BTE1 182 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 ERVK-6Q9BXR3 956 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 NFKBIZQ9BYH8 718 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 APMAPQ9HDC9 416 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.69□□□□□ -1.66
COPA-203ENST00000481040 MED17Q9NVC6 651 aa4.69□□□□□ -1.66
COPA-203ENST00000481040 DDX18Q9NVP1 670 aaKnown RBP4.69□□□□□ -1.66
COPA-203ENST00000481040 NIP7Q9Y221 180 aaKnown RBP eCLIP4.69□□□□□ -1.66
COPA-203ENST00000481040 SAA2-SAA4A0A096LPE2 208 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 MFSD2BA6NFX1 497 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 H3BTX0 84 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 KIAA0513O60268 411 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 ECI2O75521 394 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 CIB2O75838 187 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 NEBLO76041 1014 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 FGF19O95750 216 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 SERPINA3P01011 423 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 MBL2P11226 248 aaPredicted RBP4.68□□□□□ -1.66
COPA-203ENST00000481040 GZMAP12544 262 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 AADACP22760 399 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 CEACAM8P31997 349 aaPredicted RBP4.68□□□□□ -1.66
COPA-203ENST00000481040 CYLC1P35663 651 aaPredicted RBP4.68□□□□□ -1.66
COPA-203ENST00000481040 FEN1P39748 380 aaKnown RBP4.68□□□□□ -1.66
COPA-203ENST00000481040 PJVKQ0ZLH3 352 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 ZNF74Q16587 644 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 ATF7IP2Q5U623 682 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 C1orf189Q5VU69 101 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 PYHIN1Q6K0P9 492 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 LEKR1Q6ZMV7 388 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 Q6ZRG5 221 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 TUBA1AQ71U36 451 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 EFCAB13Q8IY85 973 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 UBQLNLQ8IYU4 475 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 PELI3Q8N2H9 469 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 ANKFN1Q8N957 763 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 RELL2Q8NC24 303 aaPredicted RBP4.68□□□□□ -1.66
COPA-203ENST00000481040 RAET1EQ8TD07 263 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 EMG1Q92979 244 aaKnown RBP4.68□□□□□ -1.66
COPA-203ENST00000481040 ST6GAL2Q96JF0 529 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 TUBA1CQ9BQE3 449 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 GPR61Q9BZJ8 451 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 METTL7AQ9H8H3 244 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 FN3KRPQ9HA64 309 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 MEAF6Q9HAF1 191 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 C3orf14Q9HBI5 128 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 LPAR2Q9HBW0 351 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 FAF1Q9UNN5 650 aaPredicted RBP4.68□□□□□ -1.66
COPA-203ENST00000481040 PPP2R2CQ9Y2T4 447 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 SLC6A5Q9Y345 797 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 TTC21BQ7Z4L5 1316 aa4.68□□□□□ -1.66
COPA-203ENST00000481040 CARMIL1Q5VZK9 1371 aa4.67□□□□□ -1.66
COPA-203ENST00000481040 IGHV4-61A0A0C4DH41 118 aa4.67□□□□□ -1.66
COPA-203ENST00000481040 NKX6-3A6NJ46 265 aa4.67□□□□□ -1.66
COPA-203ENST00000481040 ZNF716A6NP11 495 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms