RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 CCNB2O95067 398 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 APEX1P27695 318 aaKnown RBP9.65□□□□□ -0.86
COMMD4-203ENST00000480484 MAP2K3P46734 347 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 RABIFP47224 123 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 INPP1P49441 399 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 DIO1P49895 249 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 RNF144AP50876 292 aaPredicted RBP9.65□□□□□ -0.86
COMMD4-203ENST00000480484 CDC42P60953 191 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 CDH18Q13634 790 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 FLYWCH1Q4VC44 716 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 ATXN7L2Q5T6C5 722 aaPredicted RBP9.65□□□□□ -0.86
COMMD4-203ENST00000480484 LAMTOR1Q6IAA8 161 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 ADGRG2Q8IZP9 1017 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 PRR18Q8N4B5 295 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 DENND6BQ8NEG7 585 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 OR4M2Q8NGB6 313 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 C9orf43Q8TAL5 461 aaPredicted RBP9.65□□□□□ -0.86
COMMD4-203ENST00000480484 C7orf34Q96L11 122 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 CASD1Q96PB1 797 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 C17orf62Q9BQA9 187 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 PPIL3Q9H2H8 161 aaKnown RBP9.65□□□□□ -0.86
COMMD4-203ENST00000480484 ELOVL6Q9H5J4 265 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 PDFQ9HBH1 243 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 GALNT9Q9HCQ5 603 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 COMMD3Q9UBI1 195 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 KLHL21Q9UJP4 597 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 VPS9D1Q9Y2B5 631 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 MAN2B2Q9Y2E5 1009 aa9.65□□□□□ -0.86
COMMD4-203ENST00000480484 A0A1W2PQ45 241 aaPredicted RBP9.65□□□□□ -0.87
COMMD4-203ENST00000480484 A0A1W2PQY0 241 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 TCRBV16S1A1N1A0A5B0 115 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 WASHC1A8K0Z3 465 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 IRF1P10914 325 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 OSMP13725 252 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 TNNI3P19429 210 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 CPN2P22792 545 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 EVI2BP34910 448 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 FEN1P39748 380 aaKnown RBP9.65□□□□□ -0.87
COMMD4-203ENST00000480484 HNMTP50135 292 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 CAV3P56539 151 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 KCNJ10P78508 379 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 GANABQ14697 944 aaKnown RBP9.65□□□□□ -0.87
COMMD4-203ENST00000480484 TTLL9Q3SXZ7 439 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 IQCCQ4KMZ1 466 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 MLIPQ5VWP3 458 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 PEAR1Q5VY43 1037 aaPredicted RBP9.65□□□□□ -0.87
COMMD4-203ENST00000480484 C22orf42Q6IC83 251 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 FUT10Q6P4F1 479 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 XKRXQ6PP77 449 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 FAM151BQ6UXP7 276 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 BCDIN3DQ7Z5W3 292 aaKnown RBP9.65□□□□□ -0.87
COMMD4-203ENST00000480484 DENND1CQ8IV53 801 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 BBS7Q8IWZ6 715 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 TMEM145Q8NBT3 493 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 CREB3L4Q8TEY5 395 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 COPS8Q99627 209 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 USB1Q9BQ65 265 aaKnown RBP9.65□□□□□ -0.87
COMMD4-203ENST00000480484 POLR2J2Q9GZM3 115 aaKnown RBP9.65□□□□□ -0.87
COMMD4-203ENST00000480484 C12orf10Q9HB07 376 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 CLN6Q9NWW5 311 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 SSR3Q9UNL2 185 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 GBF1Q92538 1859 aa9.65□□□□□ -0.87
COMMD4-203ENST00000480484 TRAV20A0A0B4J274 112 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 LOC102723532A0A0G2JNH3 316 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 J3KTA2 159 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 PSIP1O75475 530 aaKnown RBP9.64□□□□□ -0.87
COMMD4-203ENST00000480484 TNFRSF6BO95407 300 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 SEMG1P04279 462 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 GSTM1P09488 218 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 SLC2A2P11168 524 aaPredicted RBP9.64□□□□□ -0.87
COMMD4-203ENST00000480484 SDC1P18827 310 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 IL11P20809 199 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 HLA-DMAP28067 261 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 ASMTP46597 345 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 CLCN7P51798 805 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.64□□□□□ -0.87
COMMD4-203ENST00000480484 MAB21L1Q13394 359 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 TNK1Q13470 666 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 PTGES3Q15185 160 aaKnown RBP9.64□□□□□ -0.87
COMMD4-203ENST00000480484 POU4F3Q15319 338 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.64□□□□□ -0.87
COMMD4-203ENST00000480484 PLAG1Q6DJT9 500 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 DNAJB8Q8NHS0 232 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 PIH1D2Q8WWB5 315 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 APIPQ96GX9 242 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 TREX2Q9BQ50 279 aaPredicted RBP9.64□□□□□ -0.87
COMMD4-203ENST00000480484 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.64□□□□□ -0.87
COMMD4-203ENST00000480484 MIXL1Q9H2W2 232 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 NIPAL2Q9H841 368 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 DNAJC27Q9NZQ0 273 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 RHCGQ9UBD6 479 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 NUP50Q9UKX7 468 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 POFUT2Q9Y2G5 429 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 MYO7AQ13402 2215 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 SLC38A8A6NNN8 435 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 SYN3O14994 580 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 KLKB1P03952 638 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 RPLP2P05387 115 aaKnown RBP9.64□□□□□ -0.87
COMMD4-203ENST00000480484 COX7A2P14406 83 aa9.64□□□□□ -0.87
COMMD4-203ENST00000480484 CSTF2P33240 577 aaKnown RBP eCLIP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms