RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ITGA3P26006 1051 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 WDR5P61964 334 aaKnown RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 POU6F2P78424 691 aaPredicted RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 GALK2Q01415 458 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 CRHR2Q13324 411 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 RAPSNQ13702 412 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 GANABQ14697 944 aaKnown RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 MICAQ29983 383 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 C3orf38Q5JPI3 329 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 FAAH2Q6GMR7 532 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 ANKRD54Q6NXT1 300 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 CYP4V2Q6ZWL3 525 aaPredicted RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 C6orf120Q7Z4R8 191 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 IQCHQ86VS3 1027 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 SNX29P2Q8IUI4 249 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 KREMEN2Q8NCW0 462 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 OR1J4Q8NGS1 313 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 ASB12Q8WXK4 309 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 DPF3Q92784 378 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 FOXRED1Q96CU9 486 aaPredicted RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 SPACA7Q96KW9 195 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 PRRT1Q99946 306 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 SEMA4CQ9C0C4 833 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 RBPJLQ9UBG7 517 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 MGAT4CQ9UBM8 478 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 RNF11Q9Y3C5 154 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 PREX1Q8TCU6 1659 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 CASZ1Q86V15 1759 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 A0A0D9SG52 128 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 J3QLW9 94 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 INPPL1O15357 1258 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 RGS9O75916 674 aaPredicted RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 IFNA5P01569 189 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 ALPLP05186 524 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 UBBP0CG47 229 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 UBCP0CG48 685 aaKnown RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 SRCP12931 536 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 ZNF19P17023 458 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 LHCGRP22888 699 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 AKT2P31751 481 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 ACTR1BP42025 376 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 CSNK1DP48730 415 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 ACTR1AP61163 376 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 KCNJ8Q15842 424 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 MAPK14Q16539 360 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 FAM83HQ6ZRV2 1179 aaPredicted RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 RFPL4BQ6ZWI9 263 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 ZNF598Q86UK7 904 aaKnown RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 NRSN1Q8IZ57 195 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 TMEM102Q8N9M5 508 aaPredicted RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 TBC1D15Q8TC07 691 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 FAM46BQ96A09 425 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 NUS1Q96E22 293 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 SLC41A3Q96GZ6 507 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 HRASLS5Q96KN8 279 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 SLC30A3Q99726 388 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 DUSP21Q9H596 190 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 PTGES2Q9H7Z7 377 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 PELI2Q9HAT8 420 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 DNMT3AQ9Y6K1 912 aaPredicted RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 OR51F1A6NGY5 319 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 VSTM5A8MXK1 200 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 MUSKO15146 869 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 TGOLN2O43493 480 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 GP1BBP13224 206 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 ZNF14P17017 642 aaPredicted RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 MAT2AP31153 395 aaKnown RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 HTR2BP41595 481 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 KCNC1P48547 511 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 DOC2AQ14183 400 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 GRB7Q14451 532 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 NHSL2Q5HYW2 709 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 SDHAF4Q5VUM1 108 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 SVBPQ8N300 66 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 ZNF565Q8N9K5 539 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 CDRT4Q8N9R6 151 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 CNIH3Q8TBE1 160 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 MFFQ9GZY8 342 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 RSPH9Q9H1X1 276 aaPredicted RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 OR10A4Q9H209 315 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 B3GAT2Q9NPZ5 323 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 FCF1Q9Y324 198 aaKnown RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 A0A1W2PQL4 384 aaPredicted RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 CDHR4A6H8M9 788 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 A8MVJ9 347 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 NEDD8-MDP1E9PL57 170 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 NDUFS4O43181 175 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 TSPAN6O43657 245 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 MAFKO60675 156 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 PQBP1O60828 265 aaKnown RBP5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 TGFB1P01137 390 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 ELK4P28324 431 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 IL12BP29460 328 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 SH3BP2P78314 561 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 APOFQ13790 326 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 SPRED3Q2MJR0 410 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 KIAA0319Q5VV43 1072 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 LIPKQ5VXJ0 399 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 DEFB128Q7Z7B8 93 aa5.88□□□□□ -1.47
PRPF4B-205ENST00000480058 SLC2A12Q8TD20 617 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms