RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 SCIMPQ6UWF3 145 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 ZNF793Q6ZN11 406 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 C20orf204Q6ZNR8 217 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 PACS2Q86VP3 889 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 PPIL6Q8IXY8 311 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 TCAIMQ8N3R3 496 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 ACOT4Q8N9L9 421 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 BBOF1Q8ND07 529 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 ZPLD1Q8TCW7 415 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 ABTB1Q969K4 478 aaPredicted RBP14.71□□□□□ -0.05
DDX56-210ENST00000479440 RHBDF1Q96CC6 855 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 PTCD3Q96EY7 689 aaKnown RBP14.71□□□□□ -0.05
DDX56-210ENST00000479440 RILPQ96NA2 401 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 F2RL3Q96RI0 385 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 TM9SF2Q99805 663 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 NAT9Q9BTE0 207 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 EFCAB11Q9BUY7 163 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 ERVK-6Q9BXR3 956 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 UBTD1Q9HAC8 227 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 SLC17A6Q9P2U8 582 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 ERVK-19Q9WJR5 959 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 SCELO95171 688 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 ACSL3O95573 720 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 ALOX15P16050 662 aaPredicted RBP14.7□□□□□ -0.06
DDX56-210ENST00000479440 CPOXP36551 454 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 EEF1A1P68104 462 aaKnown RBP14.7□□□□□ -0.06
DDX56-210ENST00000479440 CBLBQ13191 982 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 LAPTM5Q13571 262 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 ACKR1Q16570 336 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 HIST2H2ACQ16777 129 aaPredicted RBP14.7□□□□□ -0.06
DDX56-210ENST00000479440 TMEM35AQ53FP2 167 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 DCST1Q5T197 706 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 EEF1A1P5Q5VTE0 462 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 HIST2H2AA3Q6FI13 130 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 ADNP2Q6IQ32 1131 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 OR4N5Q8IXE1 308 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 ST13P4Q8IZP2 240 aaPredicted RBP14.7□□□□□ -0.06
DDX56-210ENST00000479440 SPPL2AQ8TCT8 520 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 KRT12Q99456 494 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 PHACTR1Q9C0D0 580 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 CNOT10Q9H9A5 744 aaKnown RBP14.7□□□□□ -0.06
DDX56-210ENST00000479440 SNX15Q9NRS6 342 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 DNAJC11Q9NVH1 559 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 MS4A12Q9NXJ0 267 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 WWOXQ9NZC7 414 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 CTNNAL1Q9UBT7 734 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 JMJD1CQ15652 2540 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 CSPG4Q6UVK1 2322 aa14.7□□□□□ -0.06
DDX56-210ENST00000479440 NCF1BA6NI72 391 aaPredicted RBP14.69□□□□□ -0.06
DDX56-210ENST00000479440 NCF1CA8MVU1 366 aaPredicted RBP14.69□□□□□ -0.06
DDX56-210ENST00000479440 H0Y3Z8 333 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 HRKO00198 91 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 CDH16O75309 829 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 ACTL6AO96019 429 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 NCF1P14598 390 aaPredicted RBP14.69□□□□□ -0.06
DDX56-210ENST00000479440 TSNQ15631 228 aaKnown RBP14.69□□□□□ -0.06
DDX56-210ENST00000479440 AP5B1Q2VPB7 878 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 C18orf21Q32NC0 220 aaPredicted RBP14.69□□□□□ -0.06
DDX56-210ENST00000479440 EIPR1Q53HC9 387 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 TEDDM1Q5T9Z0 273 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 ZNF441Q8N8Z8 693 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 MAGOHBQ96A72 148 aaKnown RBP14.69□□□□□ -0.06
DDX56-210ENST00000479440 PPWD1Q96BP3 646 aaKnown RBP14.69□□□□□ -0.06
DDX56-210ENST00000479440 WDR34Q96EX3 536 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 TMEM41AQ96HV5 264 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 VPS39Q96JC1 886 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 MS4A8Q9BY19 250 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 GSX2Q9BZM3 304 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 RPF2Q9H7B2 306 aaKnown RBP14.69□□□□□ -0.06
DDX56-210ENST00000479440 ZNF226Q9NYT6 803 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 C6orf203Q9P0P8 240 aaPredicted RBP14.69□□□□□ -0.06
DDX56-210ENST00000479440 PACSIN3Q9UKS6 424 aa14.69□□□□□ -0.06
DDX56-210ENST00000479440 RTCAO00442 366 aaKnown RBP14.68□□□□□ -0.06
DDX56-210ENST00000479440 OR10H2O60403 315 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 CRLF1O75462 422 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 RCBTB2O95199 551 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 TLX1P31314 330 aaPredicted RBP14.68□□□□□ -0.06
DDX56-210ENST00000479440 CXCR5P32302 372 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 NRG3P56975 720 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 SLC37A1P57057 533 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 FBXW4P57775 412 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 TNFRSF17Q02223 184 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 FOXF2Q12947 444 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 GAB1Q13480 694 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 ZNF267Q14586 743 aaPredicted RBP14.68□□□□□ -0.06
DDX56-210ENST00000479440 WIPI1Q5MNZ9 446 aaPredicted RBP14.68□□□□□ -0.06
DDX56-210ENST00000479440 BICRALQ6AI39 1079 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 DGAT2L6Q6ZPD8 337 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 UBE3DQ7Z6J8 389 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 SNX31Q8N9S9 440 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 GRK7Q8WTQ7 553 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 TANKQ92844 425 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 UCN3Q969E3 161 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 GNRHR2Q96P88 292 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 TMEM79Q9BSE2 394 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 ANGPTL4Q9BY76 406 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 TEX10Q9NXF1 929 aaPredicted RBP14.68□□□□□ -0.06
DDX56-210ENST00000479440 FETUBQ9UGM5 382 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 PHF11Q9UIL8 331 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 ZNF490Q9ULM2 529 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms