RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 HMGA2P52926 109 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 SNRPNP63162 240 aaKnown RBP10.24□□□□□ -0.77
VPS52-217ENST00000478934 MXD1Q05195 221 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 DUSP2Q05923 314 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 GPR19Q15760 415 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 SSX1Q16384 188 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 TMEM240Q5SV17 173 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 ATAD3BQ5T9A4 648 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 ZNF793Q6ZN11 406 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 DCUN1D3Q8IWE4 304 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 OR5K2Q8NHB8 316 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 WFIKKN2Q8TEU8 576 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 SETD7Q8WTS6 366 aaKnown RBP10.24□□□□□ -0.77
VPS52-217ENST00000478934 SUSD6Q92537 303 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 NEURL3Q96EH8 262 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 CHFRQ96EP1 664 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 COX14Q96I36 57 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 FERD3LQ96RJ6 166 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 INSM2Q96T92 566 aaPredicted RBP10.24□□□□□ -0.77
VPS52-217ENST00000478934 PSD2Q9BQI7 771 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 SLC6A17Q9H1V8 727 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 MMP27Q9H306 513 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 REV1Q9UBZ9 1251 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 TSC22D4Q9Y3Q8 395 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 PCDHGA4Q9Y5G9 962 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 ZAR1LA6NP61 321 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 SNPHO15079 494 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 PGRMC2O15173 223 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 SLC28A2O43868 658 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 GPX5O75715 221 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 ITGA2P17301 1181 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 TNNI3P19429 210 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 PTNP21246 168 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 ELAVL4P26378 380 aaKnown RBP10.24□□□□□ -0.77
VPS52-217ENST00000478934 S100A5P33763 92 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 MAGEA8P43361 318 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 MAPK9P45984 424 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 PXNP49023 591 aaPredicted RBP10.24□□□□□ -0.77
VPS52-217ENST00000478934 CCT3P49368 545 aaKnown RBP10.24□□□□□ -0.77
VPS52-217ENST00000478934 PCBP4P57723 403 aaKnown RBP10.24□□□□□ -0.77
VPS52-217ENST00000478934 DBPQ10586 325 aaPredicted RBP10.24□□□□□ -0.77
VPS52-217ENST00000478934 FGL2Q14314 439 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 METRNLQ641Q3 311 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 TANGO2Q6ICL3 276 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 GET4Q7L5D6 327 aaPredicted RBP10.24□□□□□ -0.77
VPS52-217ENST00000478934 SHISA5Q8N114 240 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 AMER2Q8N7J2 671 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 ZNF784Q8NCA9 323 aaPredicted RBP10.24□□□□□ -0.77
VPS52-217ENST00000478934 FGF13Q92913 245 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 TRMT61AQ96FX7 289 aaKnown RBP10.24□□□□□ -0.77
VPS52-217ENST00000478934 GPA33Q99795 319 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 ANKMY1Q9P2S6 941 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 TRPC4Q9UBN4 977 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 MOSPD1Q9UJG1 213 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 MAPRE3Q9UPY8 281 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 KCNE3Q9Y6H6 103 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 CARNS1A5YM72 827 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 A6NL46 340 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 AP3D1O14617 1153 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 CAPN5O15484 640 aaPredicted RBP10.23□□□□□ -0.77
VPS52-217ENST00000478934 FRS3O43559 492 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 VEGFDO43915 354 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 RB1P06400 928 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 ALOX5P09917 674 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 TMEM52BQ4KMG9 183 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 ZNF362Q5T0B9 420 aaPredicted RBP10.23□□□□□ -0.77
VPS52-217ENST00000478934 TMEM53Q6P2H8 277 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 UNC5DQ6UXZ4 953 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 LRRTM4Q86VH4 590 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 SLC34A3Q8N130 599 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 KIAA1958Q8N8K9 716 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 DENND6BQ8NEG7 585 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 SLC7A13Q8TCU3 470 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 SMPDL3AQ92484 453 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 TMEM203Q969S6 136 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 MTERF3Q96E29 417 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 ZNF514Q96K75 400 aaPredicted RBP10.23□□□□□ -0.77
VPS52-217ENST00000478934 C12orf66Q96MD2 445 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 ASB16Q96NS5 453 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 TREX2Q9BQ50 279 aaPredicted RBP10.23□□□□□ -0.77
VPS52-217ENST00000478934 AIF1LQ9BQI0 150 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 DPH7Q9BTV6 452 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 OR51I1Q9H343 314 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 GLIPR2Q9H4G4 154 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 FZD3Q9NPG1 666 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 SPATA7Q9P0W8 599 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 ICKQ9UPZ9 632 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 PCDHGA3Q9Y5H0 932 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 COL4A3Q01955 1670 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 MYO9BQ13459 2157 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 HTR3EA5X5Y0 456 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 A8MV72 311 aaPredicted RBP10.23□□□□□ -0.77
VPS52-217ENST00000478934 NDUFS4O43181 175 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 ERAL1O75616 437 aaKnown RBP10.23□□□□□ -0.77
VPS52-217ENST00000478934 EPPINO95925 133 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 HNRNPA1P09651 372 aaKnown RBP eCLIP10.23□□□□□ -0.77
VPS52-217ENST00000478934 HOXD12P35452 270 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 CCR8P51685 355 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 UGT2B15P54855 530 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 CDC42P60953 191 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms