RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 TNFRSF17Q02223 184 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 IRF8Q02556 426 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 LTBQ06643 244 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 SLAMF1Q13291 335 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 BIKQ13323 160 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 ZKSCAN8Q15776 578 aaPredicted RBP11.71□□□□□ -0.53
TDP2-204ENST00000478507 AP5B1Q2VPB7 878 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 NHSL2Q5HYW2 709 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 DEPDC1Q5TB30 811 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 VASNQ6EMK4 673 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 LRRC70Q7Z2Q7 622 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 ST13P4Q8IZP2 240 aaPredicted RBP11.71□□□□□ -0.53
TDP2-204ENST00000478507 SLC35F6Q8N357 371 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 ZCCHC7Q8N3Z6 543 aaKnown RBP11.71□□□□□ -0.53
TDP2-204ENST00000478507 FAM13CQ8NE31 585 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 FBXO36Q8NEA4 188 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 OR7G3Q8NG95 312 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 TANKQ92844 425 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 RBM18Q96H35 190 aaKnown RBP11.71□□□□□ -0.53
TDP2-204ENST00000478507 DOHHQ9BU89 302 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 PHACTR1Q9C0D0 580 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 OR51B5Q9H339 312 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 MS4A12Q9NXJ0 267 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 NSMCE4AQ9NXX6 385 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 MTRF1LQ9UGC7 380 aaKnown RBP11.71□□□□□ -0.53
TDP2-204ENST00000478507 TLN2Q9Y4G6 2542 aa11.71□□□□□ -0.53
TDP2-204ENST00000478507 ZANQ9Y493 2812 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 ARID1AO14497 2285 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 C15orf38-AP3S2A0A0A6YYH1 394 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 A0A1W2PPR1 153 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 MBD3L4A6NDZ8 208 aaPredicted RBP11.7□□□□□ -0.54
TDP2-204ENST00000478507 MBD3L3A6NE82 208 aaPredicted RBP11.7□□□□□ -0.54
TDP2-204ENST00000478507 TUBAL3A6NHL2 446 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 MBD3L5A6NJ08 208 aaPredicted RBP11.7□□□□□ -0.54
TDP2-204ENST00000478507 CD8B2A6NJW9 211 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 OR6C76A6NM76 312 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 WASHC1A8K0Z3 465 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 CXorf49A8MYA2 514 aaPredicted RBP11.7□□□□□ -0.54
TDP2-204ENST00000478507 SAP18O00422 153 aaKnown RBP11.7□□□□□ -0.54
TDP2-204ENST00000478507 PLPP1O14494 284 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 PHGDHO43175 533 aaKnown RBP11.7□□□□□ -0.54
TDP2-204ENST00000478507 SH3BGRLO75368 114 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 GOSR1O95249 250 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 HPNP05981 417 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 GDF1P27539 372 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 SERPINB1P30740 379 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 GALNSP34059 522 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 CDK9P50750 372 aaKnown RBP11.7□□□□□ -0.54
TDP2-204ENST00000478507 ARL4CP56559 192 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 ATP6V0D1P61421 351 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 HERVK_113P63132 956 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 ERVK-8P63133 956 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 ILF2Q12905 390 aaKnown RBP11.7□□□□□ -0.54
TDP2-204ENST00000478507 HIST2H2ACQ16777 129 aaPredicted RBP11.7□□□□□ -0.54
TDP2-204ENST00000478507 TBCELQ5QJ74 424 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 DCST1Q5T197 706 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 BICRALQ6AI39 1079 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 HIST2H2AA3Q6FI13 130 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 OR4C11Q6IEV9 310 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 MRM1Q6IN84 353 aaKnown RBP11.7□□□□□ -0.54
TDP2-204ENST00000478507 MED27Q6P2C8 311 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 SYDE1Q6ZW31 735 aaPredicted RBP11.7□□□□□ -0.54
TDP2-204ENST00000478507 CHSY3Q70JA7 882 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 GPR180Q86V85 440 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 LIX1Q8N485 282 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 RNF175Q8N4F7 328 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 MBD3L2Q8NHZ7 208 aaPredicted RBP11.7□□□□□ -0.54
TDP2-204ENST00000478507 DOK4Q8TEW6 326 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 UBE2E3Q969T4 207 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 ARSGQ96EG1 525 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 LRRC46Q96FV0 321 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 CMTM7Q96FZ5 175 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 C18orf12Q96KH6 178 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 ZNF597Q96LX8 424 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 JSRP1Q96MG2 331 aaPredicted RBP11.7□□□□□ -0.54
TDP2-204ENST00000478507 GAL3ST4Q96RP7 486 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 GPR22Q99680 433 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 ERVK-6Q9BXR3 956 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 CD244Q9BZW8 370 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.7□□□□□ -0.54
TDP2-204ENST00000478507 ERVK-19Q9WJR5 959 aa11.7□□□□□ -0.54
TDP2-204ENST00000478507 A0A1B0GTL3 188 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 DYRK3O43781 588 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 CCNT2O60583 730 aaKnown RBP11.69□□□□□ -0.54
TDP2-204ENST00000478507 GPR75O95800 540 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 IL2RAP01589 272 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 HRGP04196 525 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 CD53P19397 219 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 GMPRP36959 345 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 ARFIP1P53367 373 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 PDIA2Q13087 525 aaKnown RBP11.69□□□□□ -0.54
TDP2-204ENST00000478507 KEAP1Q14145 624 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 RPS6KA2Q15349 733 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 TMEM64Q6YI46 380 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 RNF111Q6ZNA4 994 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 SLC29A4Q7RTT9 530 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 KIF18BQ86Y91 864 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 PM20D2Q8IYS1 436 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 HUS1BQ8NHY5 278 aa11.69□□□□□ -0.54
TDP2-204ENST00000478507 LINC01560Q8TB33 94 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms