RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 MTHFD2P13995 350 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 PTX3P26022 381 aaPredicted RBP11.95□□□□□ -0.5
ABCF3-212ENST00000478288 PIGAP37287 484 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 RAP1GDS1P52306 607 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 DLX5P56178 289 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 SLC37A1P57057 533 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 CUL3Q13618 768 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 EBPQ15125 230 aaKnown RBP11.95□□□□□ -0.5
ABCF3-212ENST00000478288 HSPB2Q16082 182 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 FBXL19-AS1Q494R0 122 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 MRM1Q6IN84 353 aaKnown RBP11.95□□□□□ -0.5
ABCF3-212ENST00000478288 ARSKQ6UWY0 536 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 RNF111Q6ZNA4 994 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 RAPH1Q70E73 1250 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 LIX1LQ8IVB5 337 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 CTAGE3PQ8IX95 158 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 ULK2Q8IYT8 1036 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 OR10G3Q8NGC4 313 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 ANP32BQ92688 251 aaKnown RBP11.95□□□□□ -0.5
ABCF3-212ENST00000478288 EXT2Q93063 718 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 REPS1Q96D71 796 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 SECISBP2Q96T21 854 aaKnown RBP11.95□□□□□ -0.5
ABCF3-212ENST00000478288 OR51B5Q9H339 312 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 DDX31Q9H8H2 851 aaKnown RBP11.95□□□□□ -0.5
ABCF3-212ENST00000478288 GRHL1Q9NZI5 618 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 A0A0A6YYD5 115 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 CAPN14A8MX76 684 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 UBXN8O00124 270 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 HRKO00198 91 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 SAP18O00422 153 aaKnown RBP11.94□□□□□ -0.5
ABCF3-212ENST00000478288 SYT5O00445 386 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 RFPL3SP0C7P2 107 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 NR2F6P10588 404 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 STX2P32856 288 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 PIK3CGP48736 1102 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 HNRNPH2P55795 449 aaKnown RBP11.94□□□□□ -0.5
ABCF3-212ENST00000478288 GPX6P59796 221 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 HERVK_113P63132 956 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 ERVK-8P63133 956 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 PHEXP78562 749 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 CAV1Q03135 178 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 DLG1Q12959 904 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 SLMAPQ14BN4 828 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 SETDB1Q15047 1291 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 KBTBD12Q3ZCT8 623 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 C18orf63Q68DL7 685 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 DGAT2L6Q6ZPD8 337 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 CMC1Q7Z7K0 106 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 OR4N5Q8IXE1 308 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 TAGAPQ8N103 731 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 ZNF441Q8N8Z8 693 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 CHDHQ8NE62 594 aaPredicted RBP11.94□□□□□ -0.5
ABCF3-212ENST00000478288 C17orf47Q8NEP4 570 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 RIT1Q92963 219 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 TP53INP1Q96A56 240 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 PPWD1Q96BP3 646 aaKnown RBP11.94□□□□□ -0.5
ABCF3-212ENST00000478288 LRRC46Q96FV0 321 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 ZNF597Q96LX8 424 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 DOHHQ9BU89 302 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 CNPPD1Q9BV87 410 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 TMUB1Q9BVT8 246 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 ERVK-6Q9BXR3 956 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 EXO5Q9H790 373 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 DNAJB12Q9NXW2 375 aaKnown RBP11.94□□□□□ -0.5
ABCF3-212ENST00000478288 FOXD3Q9UJU5 478 aaPredicted RBP11.94□□□□□ -0.5
ABCF3-212ENST00000478288 CNOT11Q9UKZ1 510 aaKnown RBP11.94□□□□□ -0.5
ABCF3-212ENST00000478288 ERVK-19Q9WJR5 959 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 ASB4Q9Y574 426 aa11.94□□□□□ -0.5
ABCF3-212ENST00000478288 A0A087X1B8 175 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 AHRRA9YTQ3 701 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 FOXE1O00358 373 aaPredicted RBP11.93□□□□□ -0.5
ABCF3-212ENST00000478288 TP53I11O14683 189 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 OR10H2O60403 315 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 TRIM3O75382 744 aaPredicted RBP11.93□□□□□ -0.5
ABCF3-212ENST00000478288 KRT38O76015 456 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 SEMA3DO95025 777 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 SNX4O95219 450 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 CLPSP04118 112 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 SLC35E2P0CK97 266 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 TIMP3P35625 211 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 TMED10P49755 219 aaKnown RBP11.93□□□□□ -0.5
ABCF3-212ENST00000478288 IST1P53990 364 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 ALDH18A1P54886 795 aaKnown RBP11.93□□□□□ -0.5
ABCF3-212ENST00000478288 RPS6KA2Q15349 733 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 PCBP2Q15366 365 aaKnown RBP eCLIP11.93□□□□□ -0.5
ABCF3-212ENST00000478288 SF3B4Q15427 424 aaKnown RBP eCLIP11.93□□□□□ -0.52e-8■■■■■ 40.3
ABCF3-212ENST00000478288 FAM83EQ2M2I3 478 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 C10orf62Q5T681 223 aaPredicted RBP11.93□□□□□ -0.5
ABCF3-212ENST00000478288 PRAMEF20Q5VT98 475 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 OR52E8Q6IFG1 317 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 SEM1Q6ZVN7 128 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 WDR53Q7Z5U6 358 aaPredicted RBP11.93□□□□□ -0.5
ABCF3-212ENST00000478288 NUDT13Q86X67 352 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 LACC1Q8IV20 430 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 CENPLQ8N0S6 344 aaPredicted RBP11.93□□□□□ -0.5
ABCF3-212ENST00000478288 LIX1Q8N485 282 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 TEX9Q8N6V9 391 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 PPM1NQ8N819 430 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 FAM13CQ8NE31 585 aa11.93□□□□□ -0.5
ABCF3-212ENST00000478288 SPATA4Q8NEY3 305 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms