RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 SH3KBP1Q96B97 665 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 MTERF3Q96E29 417 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 YIPF6Q96EC8 236 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 TCEAL4Q96EI5 215 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 HSPBAP1Q96EW2 488 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 DTD2Q96FN9 168 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 PPP1R16AQ96I34 528 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF514Q96K75 400 aaPredicted RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 C7orf34Q96L11 122 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 LINC00615Q96LM1 132 aaPredicted RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 COQ10AQ96MF6 247 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 OR4K3Q96R72 315 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF347Q96SE7 839 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 MTERF1Q99551 399 aaKnown RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 DOHHQ9BU89 302 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 FUNDC2Q9BWH2 189 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 DGCR6LQ9BY27 220 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 GABARAPL3Q9BY60 117 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 WDR12Q9GZL7 423 aaKnown RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 CCDC90BQ9GZT6 254 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 TMEM38AQ9H6F2 299 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 EPS8L2Q9H6S3 715 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 CNTD2Q9H8S5 307 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 ANKHQ9HCJ1 492 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 HMG20AQ9NP66 347 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 MYNNQ9NPC7 610 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 IL23AQ9NPF7 189 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 NECTIN3Q9NQS3 549 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 PAK1IP1Q9NWT1 392 aaPredicted RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 HCFC1R1Q9NWW0 138 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 THUMPD1Q9NXG2 353 aaKnown RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 ENOPH1Q9UHY7 261 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 FBXO10Q9UK96 956 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 FBXL21Q9UKT6 434 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 PADI2Q9Y2J8 665 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 TSC22D4Q9Y3Q8 395 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 U3KQV3 271 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 C2orf16Q68DN1 1984 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 C17orf113A0A1B0GUU1 675 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 PIPSLA2A3N6 862 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 KRT87PA6NCN2 255 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 CLDN25C9JDP6 229 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 TNFRSF11BO00300 401 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 KPNA4O00629 521 aaPredicted RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 YY2O15391 372 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 HOXC11O43248 304 aaPredicted RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 PI15O43692 258 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 XPNPEP2O43895 674 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 VEGFDO43915 354 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 BCAS1O75363 584 aaPredicted RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 DIRAS1O95057 198 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ETHE1O95571 254 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ZBTB11O95625 1053 aaPredicted RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 SLC16A8O95907 504 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 IFNA14P01570 189 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 MT-ND2P03891 347 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 POU2F2P09086 479 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 CISD3P0C7P0 127 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 LINC00271P0C7V0 271 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 CYP4B1P13584 511 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ANXA8P13928 327 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF8P17098 575 aaPredicted RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ITGA2P17301 1181 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ACVR2AP27037 513 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 PBLDP30039 288 aaPredicted RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 RRM2P31350 389 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 FMO3P31513 532 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 PIK3CBP42338 1070 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 BMXP51813 675 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 MAPK10P53779 464 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 SELENOWP63302 87 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 KCNJ10P78508 379 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 EMX1Q04741 257 aaPredicted RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 PIGFQ07326 219 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 C2orf80Q0P641 193 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 NPRL3Q12980 569 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 GAB1Q13480 694 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 AQP6Q13520 282 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 PDE7AQ13946 482 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 SCARB2Q14108 478 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 STARD3Q14849 445 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 NR1D2Q14995 579 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 CLCA4Q14CN2 919 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 SPCS2Q15005 226 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 DHCR24Q15392 516 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 CTF1Q16619 201 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 DGUOKQ16854 277 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF630Q2M218 657 aaPredicted RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 CCSMST1Q4G0I0 132 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 IQCCQ4KMZ1 466 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF658BQ4V348 819 aaPredicted RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 MLIPQ5VWP3 458 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 PLPP4Q5VZY2 271 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 FAM71E1Q6IPT2 247 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 TRIM40Q6P9F5 258 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 LCTLQ6UWM7 567 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 UNC5DQ6UXZ4 953 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 IKBIPQ70UQ0 350 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 P2RY8Q86VZ1 359 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms