RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 ILKQ13418 452 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 TMEM201Q5SNT2 666 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 KIAA1211LQ6NV74 962 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 KLHL17Q6TDP4 642 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 IL17RCQ8NAC3 791 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 SMYD1Q8NB12 490 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 OR9Q2Q8NGE9 314 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 COL21A1Q96P44 957 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 OR2M4Q96R27 311 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 CDCA4Q9BXL8 241 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 MKRN2Q9H000 416 aaKnown RBP11.55□□□□□ -0.56
PTPRF-212ENST00000477970 OSGEPL1Q9H4B0 414 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 MYO7AQ13402 2215 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 HAT1O14929 419 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 VIPP01282 170 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 ATP5A1P25705 553 aaKnown RBP11.55□□□□□ -0.56
PTPRF-212ENST00000477970 TIE1P35590 1138 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 SERPINB10P48595 397 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 SFSWAPQ12872 951 aaKnown RBP11.55□□□□□ -0.56
PTPRF-212ENST00000477970 ZNF846Q147U1 533 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 DGUOKQ16854 277 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 TCTN3Q6NUS6 607 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 TNFAIP8L2Q6P589 184 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-212ENST00000477970 AHSA2Q719I0 299 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 OR56A1Q8NGH5 318 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 OR14C36Q8NHC7 312 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 UBE2FQ969M7 185 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 AKIP1Q9NQ31 210 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 FAIMQ9NVQ4 179 aa11.55□□□□□ -0.56
PTPRF-212ENST00000477970 HEATR5BQ9P2D3 2071 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 COL6A3P12111 3177 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 A0A1W2PQF6 199 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 PRSS38A1L453 326 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 EFCAB10A6NFE3 127 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 CASC3O15234 703 aaKnown RBP11.54□□□□□ -0.56
PTPRF-212ENST00000477970 OSMP13725 252 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 ELAVL4P26378 380 aaKnown RBP11.54□□□□□ -0.56
PTPRF-212ENST00000477970 PPP2R1BP30154 601 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 SLC15A1P46059 708 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 MLLT10P55197 1068 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 TUBA1BP68363 451 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 PTGES3Q15185 160 aaKnown RBP11.54□□□□□ -0.56
PTPRF-212ENST00000477970 RPS26P11Q5JNZ5 115 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-212ENST00000477970 RNLSQ5VYX0 342 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 TUBA1AQ71U36 451 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 TRIM69Q86WT6 500 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 KRT73Q86Y46 540 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 AMER3Q8N944 861 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 AQP11Q8NBQ7 271 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 OR52J3Q8NH60 311 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 C17orf62Q9BQA9 187 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 RHNO1Q9BSD3 238 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 RSPO3Q9BXY4 272 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-212ENST00000477970 OR51I1Q9H343 314 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 ANKMY1Q9P2S6 941 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 REV1Q9UBZ9 1251 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 AASSQ9UDR5 926 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 TMCC3Q9ULS5 477 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 A3GALT2U3KPV4 340 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 A0A1W2PRQ8 180 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 C10orf142B7Z368 130 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 ANHXE9PGG2 379 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 TNFRSF10AO00220 468 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 AXIN1O15169 862 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 APBB3O95704 486 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 GASTP01350 101 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 LIMK1P53667 647 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 STXBP1P61764 594 aaKnown RBP11.54□□□□□ -0.56
PTPRF-212ENST00000477970 OCA2Q04671 838 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 TGM3Q08188 693 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 DGCR6Q14129 220 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 KRT33BQ14525 404 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 FRMPD2BQ6IN97 320 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 SLC48A1Q6P1K1 146 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 PAQR7Q86WK9 346 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 SLC44A2Q8IWA5 706 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-212ENST00000477970 SH3YL1Q96HL8 342 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-212ENST00000477970 TREX2Q9BQ50 279 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-212ENST00000477970 RACGAP1Q9H0H5 632 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 TRPV5Q9NQA5 729 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 BRWD1Q9NSI6 2320 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 LRP4O75096 1905 aa11.54□□□□□ -0.56
PTPRF-212ENST00000477970 A0A0G2JPF8 293 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 PRAMEF27A3QJZ7 478 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 HNRNPCL2B2RXH8 293 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 HNRNPCL3B7ZW38 293 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 H1F0P07305 194 aaKnown RBP11.53□□□□□ -0.56
PTPRF-212ENST00000477970 HNRNPCL4P0DMR1 293 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 CHMP24386 653 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 PSMB9P28065 219 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 SLC19A1P41440 591 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 CRISP3P54108 245 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 OLR1P78380 273 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 NDUFA9Q16795 377 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 SLX4IPQ5VYV7 408 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 C12orf73Q69YU5 71 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 SLC15A4Q8N697 577 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 ACOT4Q8N9L9 421 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 DRAXINQ8NBI3 349 aaPredicted RBP11.53□□□□□ -0.56
PTPRF-212ENST00000477970 FAM46DQ8NEK8 389 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms