RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 NRBF2Q96F24 287 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 LRGUKQ96M69 825 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 ROGDIQ9GZN7 287 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 AP4B1Q9Y6B7 739 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 DMXL1Q9Y485 3027 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 RNF103-CHMP3A0A140T963 221 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 FGF17O60258 216 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 ALOX12P18054 663 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 KRT33BQ14525 404 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 SUZ12Q15022 739 aaKnown RBP11.38□□□□□ -0.59
PRPF39-203ENST00000477626 LTB4RQ15722 352 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 PROX2Q3B8N5 592 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 GCNT6Q5T4J0 391 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 CYP4Z1Q86W10 505 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 HS3ST5Q8IZT8 346 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 ADAMTS16Q8TE57 1224 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 SNX19Q92543 992 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 EPYCQ99645 322 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 ZNF768Q9H5H4 540 aaKnown RBP11.38□□□□□ -0.59
PRPF39-203ENST00000477626 ZNF451Q9Y4E5 1061 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 A0A0J9YVX5 310 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 ARRDC5A6NEK1 342 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 SLC9B1P1A6NJY1 282 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 SRPX2O60687 465 aaPredicted RBP11.38□□□□□ -0.59
PRPF39-203ENST00000477626 PROS1P07225 676 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 LYNP07948 512 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 CT62P0C5K7 136 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 ALDH3A2P51648 485 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 ARSFP54793 590 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 SCARB2Q14108 478 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 DUSP7Q16829 419 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 CCDC71Q8IV32 467 aaPredicted RBP11.38□□□□□ -0.59
PRPF39-203ENST00000477626 CHDHQ8NE62 594 aaPredicted RBP11.38□□□□□ -0.59
PRPF39-203ENST00000477626 VPS37AQ8NEZ2 397 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 NFKBIDQ8NI38 313 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 MOAP1Q96BY2 351 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 MAN2C1Q9NTJ4 1040 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 NAALAD2Q9Y3Q0 740 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 ADAM10O14672 748 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 PLOD3O60568 738 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 SMNDC1O75940 238 aaKnown RBP eCLIP11.38□□□□□ -0.596e-25■■■□□ 17.2
PRPF39-203ENST00000477626 DNAJB5O75953 348 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 TP53P04637 393 aaPredicted RBP11.38□□□□□ -0.59
PRPF39-203ENST00000477626 NR2F6P10588 404 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 HOXD12P35452 270 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 RP1P56715 2156 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 RAB38P57729 211 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 RPS26P62854 115 aaKnown RBP11.38□□□□□ -0.59
PRPF39-203ENST00000477626 FAM98BQ52LJ0 330 aaKnown RBP11.38□□□□□ -0.59
PRPF39-203ENST00000477626 WDR45BQ5MNZ6 344 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 ABHD13Q7L211 337 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 MCATQ8IVS2 390 aaKnown RBP11.38□□□□□ -0.59
PRPF39-203ENST00000477626 CSNK1A1LQ8N752 337 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 C11orf65Q8NCR3 313 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 OR10Q1Q8NGQ4 319 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 OR9A2Q8NGT5 310 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 OR4C6Q8NH72 309 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 OR10G6Q8NH81 332 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 OSBPL11Q9BXB4 747 aa11.38□□□□□ -0.59
PRPF39-203ENST00000477626 GSAPA4D1B5 854 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 GLOD5A6NK44 160 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 EI24O14681 340 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 SLC35G6P0C7Q6 338 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 CTSEP14091 401 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 GALNSP34059 522 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 PDX1P52945 283 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 PLA2G2CQ5R387 149 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 ZNF385CQ66K41 422 aaPredicted RBP11.37□□□□□ -0.59
PRPF39-203ENST00000477626 SLC23A3Q6PIS1 610 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 ARHGAP22Q7Z5H3 698 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 FBXO30Q8TB52 745 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 EXOSC8Q96B26 276 aaKnown RBP11.37□□□□□ -0.59
PRPF39-203ENST00000477626 RDH12Q96NR8 316 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 KLHL25Q9H0H3 589 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 VCX3BQ9H321 246 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 EPB41L1Q9H4G0 881 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 SIDT1Q9NXL6 827 aaKnown RBP11.37□□□□□ -0.59
PRPF39-203ENST00000477626 RAPGEFL1Q9UHV5 662 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 TPST2O60704 377 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 LYPD3O95274 346 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 NSA2O95478 260 aaKnown RBP11.37□□□□□ -0.59
PRPF39-203ENST00000477626 DDX5P17844 614 aaKnown RBP11.37□□□□□ -0.59
PRPF39-203ENST00000477626 IL10P22301 178 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 RORAP35398 523 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 PIGAP37287 484 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 HSPA13P48723 471 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 DAPP51397 102 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 DSTNP60981 165 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 CDK6Q00534 326 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 RGS1Q08116 209 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 COL9A2Q14055 689 aaPredicted RBP11.37□□□□□ -0.59
PRPF39-203ENST00000477626 NKAIN2Q5VXU1 208 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 LAIR1Q6GTX8 287 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 BMP8AQ7Z5Y6 402 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 LACC1Q8IV20 430 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 SVOPLQ8N434 492 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 BTBD2Q9BX70 525 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.37□□□□□ -0.59
PRPF39-203ENST00000477626 SLC38A1Q9H2H9 487 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 CLK4Q9HAZ1 481 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms