RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 PPWD1Q96BP3 646 aaKnown RBP10.38□□□□□ -0.75
BRCA1-213ENST00000476777 FBXL20Q96IG2 436 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 GNRHR2Q96P88 292 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 DGAT2Q96PD7 388 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 KCNC2Q96PR1 638 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 GAL3ST4Q96RP7 486 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 RYDENQ9NUL5 291 aaKnown RBP10.38□□□□□ -0.75
BRCA1-213ENST00000476777 NDRG3Q9UGV2 375 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 ZNF490Q9ULM2 529 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-213ENST00000476777 GUCA1BQ9UMX6 200 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 C15orf41Q9Y2V0 281 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 ANK2Q01484 3957 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 NPEPPSL1A6NEC2 478 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 RNF212BA8MTL3 300 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 CTIFO43310 598 aaKnown RBP10.37□□□□□ -0.75
BRCA1-213ENST00000476777 PRAMEF4O60810 478 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 SNX4O95219 450 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 NUDT7P0C024 238 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 ZNF37AP17032 561 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-213ENST00000476777 FPR1P21462 350 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 ATP5A1P25705 553 aaKnown RBP10.37□□□□□ -0.75
BRCA1-213ENST00000476777 RPL21P46778 160 aaKnown RBP10.37□□□□□ -0.75
BRCA1-213ENST00000476777 ZNF75DP51815 510 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 NAGLUP54802 743 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 FBXW4P57775 412 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 KRTAP1-1Q07627 177 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 TGM3Q08188 693 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 RCAN2Q14206 197 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 PRAMEF9Q5VWM5 478 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 TTC27Q6P3X3 843 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 TMEM64Q6YI46 380 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 PHC2Q8IXK0 858 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 NAT8LQ8N9F0 302 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 ACOT4Q8N9L9 421 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 BBOF1Q8ND07 529 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 C7orf57Q8NEG2 295 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 DOK4Q8TEW6 326 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 ANKRD7Q92527 254 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 RHBDF1Q96CC6 855 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 RBM18Q96H35 190 aaKnown RBP10.37□□□□□ -0.75
BRCA1-213ENST00000476777 RILPQ96NA2 401 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 ZFP3Q96NJ6 502 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 EGFL8Q99944 293 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 TBCDQ9BTW9 1192 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 GSX2Q9BZM3 304 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 ROGDIQ9GZN7 287 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 WWTR1Q9GZV5 400 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 EHD1Q9H4M9 534 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 UBTD1Q9HAC8 227 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 OARD1Q9Y530 152 aa10.37□□□□□ -0.75
BRCA1-213ENST00000476777 RAI1Q7Z5J4 1906 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-213ENST00000476777 A8MXE2 369 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 RTCAO00442 366 aaKnown RBP10.36□□□□□ -0.75
BRCA1-213ENST00000476777 TP53I11O14683 189 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 DYRK3O43781 588 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 SCELO95171 688 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 RCBTB2O95199 551 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 CYP4B1P13584 511 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 CPN2P22792 545 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 SLC37A1P57057 533 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 PLIN5Q00G26 463 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 EBPQ15125 230 aaKnown RBP10.36□□□□□ -0.75
BRCA1-213ENST00000476777 RPS6KA2Q15349 733 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 WIPI1Q5MNZ9 446 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-213ENST00000476777 TEDDM1Q5T9Z0 273 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 FAM45BPQ6NSW5 357 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 PLXDC2Q6UX71 529 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 SLC29A4Q7RTT9 530 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 ADGRE4PQ86SQ3 457 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 PACS2Q86VP3 889 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 ZNF441Q8N8Z8 693 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 SRFBP1Q8NEF9 429 aaKnown RBP10.36□□□□□ -0.75
BRCA1-213ENST00000476777 FAM45AQ8TCE6 357 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 SPPL2AQ8TCT8 520 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 INTS12Q96CB8 462 aaKnown RBP10.36□□□□□ -0.75
BRCA1-213ENST00000476777 ART5Q96L15 291 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 WFIKKN1Q96NZ8 548 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 TM9SF2Q99805 663 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 TUBA1CQ9BQE3 449 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 ANGPTL4Q9BY76 406 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 PIGMQ9H3S5 423 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.36□□□□□ -0.75
BRCA1-213ENST00000476777 GPRC5BQ9NZH0 403 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 SPACA6W5XKT8 324 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 ALPK2Q86TB3 2170 aa10.36□□□□□ -0.75
BRCA1-213ENST00000476777 IQANK1A0A1B0GTG1 560 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 TTC4O95801 387 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 CLPSP04118 112 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 C8BP07358 591 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 CPN1P15169 458 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 CD22P20273 847 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 HIST1H1TP22492 207 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-213ENST00000476777 PTPN6P29350 595 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 MC3RP41968 323 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 CASP3P42574 277 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 MASP1P48740 699 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 PTH2RP49190 550 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 HERVK_113P63132 956 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 ERVK-8P63133 956 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 FAM27E3Q08E93 113 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms