RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 FAM131CQ96AQ9 280 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 EXOSC8Q96B26 276 aaKnown RBP15.58■□□□□ 0.09
TMEM53-208ENST00000476724 ZNF354BQ96LW1 612 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 C12orf66Q96MD2 445 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 TEFMQ96QE5 360 aaKnown RBP15.58■□□□□ 0.09
TMEM53-208ENST00000476724 FAIM2Q9BWQ8 316 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 MROQ9BYG7 248 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 ABCG4Q9H172 646 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 MMP27Q9H306 513 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 C8orf33Q9H7E9 229 aaPredicted RBP15.58■□□□□ 0.09
TMEM53-208ENST00000476724 AMBNQ9NP70 447 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 CLN6Q9NWW5 311 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 A3GALT2U3KPV4 340 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 PMF1-BGLAPU3KQ54 211 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 DSPPQ9NZW4 1301 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 A0A0A6YYD5 115 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 HMGN4O00479 90 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 PLRG1O43660 514 aaKnown RBP15.58■□□□□ 0.08
TMEM53-208ENST00000476724 CNOT3O75175 753 aaKnown RBP15.58■□□□□ 0.08
TMEM53-208ENST00000476724 RPLP0P05388 317 aaKnown RBP15.58■□□□□ 0.08
TMEM53-208ENST00000476724 POU2F1P14859 743 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 CHMP24386 653 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 ARFIP1P53367 373 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 ST3GAL4Q11206 333 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 ATP1A4Q13733 1029 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 INAQ16352 499 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 SYT16Q17RD7 645 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 FAM180BQ6P0A1 224 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 TMEM92Q6UXU6 159 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 USP43Q70EL4 1123 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 UBE3DQ7Z6J8 389 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 LINC01555Q8NAE3 123 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 TP53I13Q8NBR0 393 aaPredicted RBP15.58■□□□□ 0.08
TMEM53-208ENST00000476724 FAM46DQ8NEK8 389 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 CREB3L4Q8TEY5 395 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 SNRNP27Q8WVK2 155 aaKnown RBP15.58■□□□□ 0.08
TMEM53-208ENST00000476724 DHRS1Q96LJ7 313 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 CAMK1GQ96NX5 476 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 DACH2Q96NX9 599 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 INSM2Q96T92 566 aaPredicted RBP15.58■□□□□ 0.08
TMEM53-208ENST00000476724 CDCA4Q9BXL8 241 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 DCSTAMPQ9H295 470 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 MS4A12Q9NXJ0 267 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 GPR83Q9NYM4 423 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 P2RX2Q9UBL9 471 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 OR1A2Q9Y585 309 aa15.58■□□□□ 0.08
TMEM53-208ENST00000476724 A0A1W2PQU0 124 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 FUOMA2VDF0 154 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 FAAHO00519 579 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 FFAR1O14842 300 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 STSP08842 583 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 OSMP13725 252 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 ANXA11P50995 505 aaKnown RBP15.57■□□□□ 0.08
TMEM53-208ENST00000476724 ADPRHP54922 357 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 RPS26P62854 115 aaKnown RBP15.57■□□□□ 0.08
TMEM53-208ENST00000476724 ILKQ13418 452 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 TRIM16LQ309B1 348 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 RPS26P11Q5JNZ5 115 aaPredicted RBP15.57■□□□□ 0.08
TMEM53-208ENST00000476724 TOR1AIP1Q5JTV8 583 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 DCST1Q5T197 706 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 GPR32P1Q8NGA4 272 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 OR2L8Q8NGY9 312 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 RPL3LQ92901 407 aaKnown RBP15.57■□□□□ 0.08
TMEM53-208ENST00000476724 UCK2Q9BZX2 261 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 GIN1Q9NXP7 522 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 SELENONQ9NZV5 590 aa15.57■□□□□ 0.08
TMEM53-208ENST00000476724 LRIT2A6NDA9 550 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 LCMT2O60294 686 aaKnown RBP15.56■□□□□ 0.08
TMEM53-208ENST00000476724 GUCY1B2O75343 617 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 H1F0P07305 194 aaKnown RBP15.56■□□□□ 0.08
TMEM53-208ENST00000476724 MAT2AP31153 395 aaKnown RBP15.56■□□□□ 0.08
TMEM53-208ENST00000476724 BCAP31P51572 246 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 OXA1LQ15070 435 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 TCTN3Q6NUS6 607 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 PTCHD4Q6ZW05 846 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 ZNF367Q7RTV3 350 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 KRT73Q86Y46 540 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 MFSD4AQ8N468 514 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 B3GNT7Q8NFL0 401 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 OR2A1Q8NGT9 310 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 RAB8BQ92930 207 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 NRTNQ99748 197 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 PHF7Q9BWX1 381 aaPredicted RBP15.56■□□□□ 0.08
TMEM53-208ENST00000476724 TEX10Q9NXF1 929 aaPredicted RBP15.56■□□□□ 0.08
TMEM53-208ENST00000476724 RHCGQ9UBD6 479 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 SEC14L3Q9UDX4 400 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 ACAD8Q9UKU7 415 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 WDR37Q9Y2I8 494 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 KLK4Q9Y5K2 254 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 HEATR5BQ9P2D3 2071 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 B4GALT2O60909 372 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 RNGTTO60942 597 aaKnown RBP15.56■□□□□ 0.08
TMEM53-208ENST00000476724 ADORA3P0DMS8 318 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 PIPP12273 146 aaPredicted RBP15.56■□□□□ 0.08
TMEM53-208ENST00000476724 ACP5P13686 325 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 PPP2R1BP30154 601 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 SSR2P43308 183 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 NUDT6P53370 316 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 ABATP80404 500 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 MRPS21P82921 87 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms