RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	ZNF599	Q96NL3	588 aa		4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912	RHNO1	Q9BSD3	238 aa		4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912	KLHL4	Q9C0H6	718 aa		4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912	ABCG4	Q9H172	646 aa		4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912	ASB7	Q9H672	318 aa		4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912	ERVMER34-1	Q9H9K5	563 aa		4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912	PELI2	Q9HAT8	420 aa		4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912	SGK2	Q9HBY8	427 aa		4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912	ELOVL2	Q9NXB9	296 aa		4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912	CPSF2	Q9P2I0	782 aa	Known RBP	4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912	EXO1	Q9UQ84	846 aa	Known RBP	4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912	MRPS28	Q9Y2Q9	187 aa	Known RBP	4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912	MMP24	Q9Y5R2	645 aa		4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912	TP53BP1	Q12888	1972 aa	Predicted RBP	4.18	□□□□□ -1.74
PRKD3-208	ENST00000475912		A0A087X002	238 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	VPS37C	A5D8V6	355 aa	Predicted RBP	4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	LRRC72	A6NJI9	287 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	PP2D1	A8MPX8	630 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	ANKRD63	C9JTQ0	380 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	UBE2C	O00762	179 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	HUS1	O60921	280 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	KRT7	P08729	469 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	OR52Z1	P0C646	297 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	LIF	P15018	202 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	TRIM21	P19474	475 aa	Known RBP	4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	CBL	P22681	906 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	KRT2	P35908	639 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	LHX1	P48742	406 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	SUOX	P51687	545 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	ITGA9	Q13797	1035 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	TMEM187	Q14656	261 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	ZFP69	Q49AA0	526 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	MDH1B	Q5I0G3	518 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	FFAR4	Q5NUL3	377 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	CRYBG2	Q8N1P7	616 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	KCNK16	Q96T55	309 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	NEUROG2	Q9H2A3	272 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	ADNP	Q9H2P0	1102 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	DPEP3	Q9H4B8	488 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	PRSS16	Q9NQE7	514 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	OSER1	Q9NX31	292 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	ARHGEF38	Q9NXL2	777 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	GDAP2	Q9NXN4	497 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	ANAPC2	Q9UJX6	822 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	CDH9	Q9ULB4	789 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	CA5B	Q9Y2D0	317 aa		4.17	□□□□□ -1.74
PRKD3-208	ENST00000475912	ZFC3H1	O60293	1989 aa	Known RBP	4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	CACNA1D	Q01668	2161 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	FAM92A	A1XBS5	289 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	CLDN5	O00501	218 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	LAT	O43561	262 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	GPR137B	O60478	399 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	NEBL	O76041	1014 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	CTDNEP1	O95476	244 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	LIPC	P11150	499 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	FDPS	P14324	419 aa	Known RBP	4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	HLA-F	P30511	346 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	IRX1	P78414	480 aa	Predicted RBP	4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	PPP2R2B	Q00005	443 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	TFAM	Q00059	246 aa	Known RBP	4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	PRKAA1	Q13131	559 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	DLG2	Q15700	870 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	CDKN3	Q16667	212 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	KRT71	Q3SY84	523 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	TTC31	Q49AM3	519 aa	Predicted RBP	4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	FHL5	Q5TD97	284 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	KRT79	Q5XKE5	535 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	ZNF776	Q68DI1	518 aa	Predicted RBP	4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	ADAL	Q6DHV7	355 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	GUSBP11	Q6P575	273 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	ISCA2	Q86U28	154 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	PLD3	Q8IV08	490 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	NUP93	Q8N1F7	819 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	CSGALNACT2	Q8N6G5	542 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	LRRC52	Q8N7C0	313 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	SYT2	Q8N9I0	419 aa	Predicted RBP	4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	AVL9	Q8NBF6	648 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	DDHD1	Q8NEL9	900 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	OR2T34	Q8NGX1	318 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	WDR36	Q8NI36	951 aa	Known RBP	4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	MOAP1	Q96BY2	351 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	TMCO6	Q96DC7	493 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	SLC47A1	Q96FL8	570 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	ZNF274	Q96GC6	653 aa	Predicted RBP	4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	RADIL	Q96JH8	1075 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	DDO	Q99489	341 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	HGH1	Q9BTY7	390 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	AP1M1	Q9BXS5	423 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	MRPL1	Q9BYD6	325 aa	Known RBP	4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	NACA2	Q9H009	215 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	OSGEPL1	Q9H4B0	414 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	FGF22	Q9HCT0	170 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	SLC35C2	Q9NQQ7	365 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	FBXL12	Q9NXK8	326 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	NLGN3	Q9NZ94	848 aa		4.16	□□□□□ -1.74
PRKD3-208	ENST00000475912	IL37	Q9NZH6	218 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms