RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SEMA4CQ9C0C4 833 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 AKTIPQ9H8T0 292 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 EHD3Q9NZN3 535 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 ABI3Q9P2A4 366 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 BAIAP2L1Q9UHR4 511 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 EIF3LQ9Y262 564 aaKnown RBP11.58□□□□□ -0.56
DDX56-209ENST00000473924 CACNA1GO43497 2377 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 A0A1W2PS29 197 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 DYNC1I1O14576 645 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 AKAP10O43572 662 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 LRATO95237 230 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 PRPS2P11908 318 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 BCKDHAP12694 445 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 GALNSP34059 522 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 ERVK-8P63133 956 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 EMX2Q04743 252 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 NFATC3Q12968 1075 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 MFAP5Q13361 173 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 MEP1AQ16819 746 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 SPRED3Q2MJR0 410 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 SOWAHCQ53LP3 525 aaPredicted RBP11.57□□□□□ -0.56
DDX56-209ENST00000473924 IL23RQ5VWK5 629 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 FCRLBQ6BAA4 426 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 HSDL2Q6YN16 418 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 DGAT2L6Q6ZPD8 337 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 PTRH1Q86Y79 214 aaKnown RBP11.57□□□□□ -0.56
DDX56-209ENST00000473924 WDR75Q8IWA0 830 aaKnown RBP11.57□□□□□ -0.56
DDX56-209ENST00000473924 GALNT12Q8IXK2 581 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 LRRC25Q8N386 305 aaPredicted RBP11.57□□□□□ -0.56
DDX56-209ENST00000473924 LIX1Q8N485 282 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 TEX19Q8NA77 164 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 APCDD1LQ8NCL9 501 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 OR1N1Q8NGS0 311 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.57□□□□□ -0.56
DDX56-209ENST00000473924 DOK4Q8TEW6 326 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 THAP3Q8WTV1 239 aaPredicted RBP11.57□□□□□ -0.56
DDX56-209ENST00000473924 CKAP2Q8WWK9 683 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 SENP5Q96HI0 755 aaPredicted RBP11.57□□□□□ -0.56
DDX56-209ENST00000473924 FBXL20Q96IG2 436 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 MAGEB18Q96M61 343 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 C7orf26Q96N11 449 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 BBS4Q96RK4 519 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 LMF1Q96S06 567 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 BRINP2Q9C0B6 783 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 MEAF6Q9HAF1 191 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 SLC35C2Q9NQQ7 365 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.57□□□□□ -0.56
DDX56-209ENST00000473924 STMN3Q9NZ72 180 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 NOP53Q9NZM5 478 aaKnown RBP11.57□□□□□ -0.56
DDX56-209ENST00000473924 PPIEQ9UNP9 301 aaKnown RBP11.57□□□□□ -0.56
DDX56-209ENST00000473924 ERVK-19Q9WJR5 959 aa11.57□□□□□ -0.56
DDX56-209ENST00000473924 TNRC6AQ8NDV7 1962 aaKnown RBP11.57□□□□□ -0.56
DDX56-209ENST00000473924 PIEZO2Q9H5I5 2752 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 ATMQ13315 3056 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 DYTNA2CJ06 578 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 ZFAND5O76080 213 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 DDAH2O95865 285 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 ATP1B1P05026 303 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 LBPP18428 481 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 MPIP34949 423 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 SOX11P35716 441 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 HPCAL1P37235 193 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 GPR143P51810 404 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 ARG2P78540 354 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 SMU1Q2TAY7 513 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 ACER2Q5QJU3 275 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 H3F3CQ6NXT2 135 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 IGSF10Q6WRI0 2623 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 RNF111Q6ZNA4 994 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 FAM47EQ6ZV65 393 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 R3HCC1LQ7Z5L2 792 aaKnown RBP11.56□□□□□ -0.56
DDX56-209ENST00000473924 RPS19BP1Q86WX3 136 aaKnown RBP11.56□□□□□ -0.56
DDX56-209ENST00000473924 CCDC116Q8IYX3 515 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 ZNF321PQ8N8H1 164 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 ZNF721Q8TF20 911 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 DOCK10Q96BY6 2186 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 PPCDCQ96CD2 204 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 CNRIP1Q96F85 164 aaPredicted RBP11.56□□□□□ -0.56
DDX56-209ENST00000473924 CDCP1Q9H5V8 836 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 REEP4Q9H6H4 257 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 CXorf21Q9HAI6 301 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 ZBTB20Q9HC78 741 aaPredicted RBP11.56□□□□□ -0.56
DDX56-209ENST00000473924 SLCO1B3Q9NPD5 702 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 SH3BP4Q9P0V3 963 aa11.56□□□□□ -0.56
DDX56-209ENST00000473924 ZFYVE26Q68DK2 2539 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 GOLGA8QA0A0J9YX86 632 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 GOLGA8OA6NCC3 632 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 GOLGA8NF8WBI6 632 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 HRKO00198 91 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 FCHO1O14526 889 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 PRB1P04280 392 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 DDX5P17844 614 aaKnown RBP11.55□□□□□ -0.56
DDX56-209ENST00000473924 EPHA3P29320 983 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 NTSP30990 170 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 RPL3P39023 403 aaKnown RBP11.55□□□□□ -0.56
DDX56-209ENST00000473924 KLRB1Q12918 225 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 PTGR1Q14914 329 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 NXNQ6DKJ4 435 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 ANKRD26P1Q6NSI1 321 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 IGFL3Q6UXB1 125 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms