RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 PCDHGB3Q9Y5G1 929 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 TEX264Q9Y6I9 313 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 MED12Q93074 2177 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 C2orf72A6NCS6 295 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 GLOD5A6NK44 160 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 C17orf51A8MQB3 221 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 DEFB108AA8MXU0 73 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 CXorf49A8MYA2 514 aaPredicted RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 AHRRA9YTQ3 701 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 EEF1E1-BLOC1S5C9J1V9 151 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 PGRMC1O00264 195 aaKnown RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 DVL2O14641 736 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 DNALI1O14645 258 aaPredicted RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 SMAD7O15105 426 aaKnown RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 EEF1E1O43324 174 aaKnown RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 TMPRSS11DO60235 418 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 EEDO75530 441 aaKnown RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 HPNP05981 417 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 CTAGE8P0CG41 777 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 HIST1H1TP22492 207 aaPredicted RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 GDF1P27539 372 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 LOXP28300 417 aaPredicted RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 SSTR4P31391 388 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 GGT5P36269 586 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 PTGDSP41222 190 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 EFTUD2Q15029 972 aaKnown RBP eCLIP8.78□□□□□ -1
MCF2L-223ENST00000473345 WIPI1Q5MNZ9 446 aaPredicted RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 Q5PR19 223 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 GPSM1Q86YR5 675 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 LACC1Q8IV20 430 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 CTAGE4Q8IX94 777 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 PRR22Q8IZ63 422 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 BBOF1Q8ND07 529 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 OR5L2Q8NGL0 311 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 FBXL20Q96IG2 436 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 HS3ST6Q96QI5 342 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 GAL3ST4Q96RP7 486 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 TRIB1Q96RU8 372 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 NAP1L3Q99457 506 aaPredicted RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 DOHHQ9BU89 302 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 ZNF395Q9H8N7 513 aaPredicted RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 PPANQ9NQ55 473 aaKnown RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 DNAJC11Q9NVH1 559 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 QPCTLQ9NXS2 382 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 BOKQ9UMX3 212 aaPredicted RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 CAMK2AQ9UQM7 478 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 MRPS33Q9Y291 106 aaKnown RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 DTX4Q9Y2E6 619 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 MTO1Q9Y2Z2 717 aaKnown RBP8.78□□□□□ -1
MCF2L-223ENST00000473345 NPFFR2Q9Y5X5 522 aa8.78□□□□□ -1
MCF2L-223ENST00000473345 FREM3P0C091 2139 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 A0A1W2PR48 441 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 ANKDD1BA6NHY2 528 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 CD8B2A6NJW9 211 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 CCDC188H7C350 402 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 PLPP1O14494 284 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 PHGDHO43175 533 aaKnown RBP8.77□□□□□ -1.01
MCF2L-223ENST00000473345 H2AFYO75367 372 aaKnown RBP8.77□□□□□ -1.01
MCF2L-223ENST00000473345 TTC4O95801 387 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 CPN2P22792 545 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 CTSSP25774 331 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 PTPN6P29350 595 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 CCKARP32238 428 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 MSH2P43246 934 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 DLG1Q12959 904 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 SERTAD2Q14140 314 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 CAPRIN1Q14444 709 aaKnown RBP8.77□□□□□ -1.01
MCF2L-223ENST00000473345 ZNF267Q14586 743 aaPredicted RBP8.77□□□□□ -1.01
MCF2L-223ENST00000473345 MRM1Q6IN84 353 aaKnown RBP8.77□□□□□ -1.01
MCF2L-223ENST00000473345 CXXC5Q7LFL8 322 aaKnown RBP8.77□□□□□ -1.01
MCF2L-223ENST00000473345 MAATS1Q7Z4T9 603 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 ADGRE4PQ86SQ3 457 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 LUZP2Q86TE4 346 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 YRDCQ86U90 279 aaKnown RBP8.77□□□□□ -1.01
MCF2L-223ENST00000473345 ANKMY2Q8IV38 441 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 SNX31Q8N9S9 440 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 TTLQ8NG68 377 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 SLC22A8Q8TCC7 542 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 SPPL2AQ8TCT8 520 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 NUDT8Q8WV74 236 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 NANOS1Q8WY41 292 aaKnown RBP8.77□□□□□ -1.01
MCF2L-223ENST00000473345 ANKRD7Q92527 254 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 ADIPOR1Q96A54 375 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 MARK4Q96L34 752 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 Q96MF0 132 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 RILPQ96NA2 401 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 DGAT2Q96PD7 388 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 KCNC2Q96PR1 638 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 TUBA1CQ9BQE3 449 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 DDX47Q9H0S4 455 aaKnown RBP8.77□□□□□ -1.01
MCF2L-223ENST00000473345 NEUROD4Q9HD90 331 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 BEX4Q9NWD9 120 aaPredicted RBP8.77□□□□□ -1.01
MCF2L-223ENST00000473345 MOCS1Q9NZB8 636 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 GPRC5BQ9NZH0 403 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 C6orf203Q9P0P8 240 aaPredicted RBP8.77□□□□□ -1.01
MCF2L-223ENST00000473345 CTNNAL1Q9UBT7 734 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 PTBP2Q9UKA9 531 aaKnown RBP8.77□□□□□ -1.01
MCF2L-223ENST00000473345 C15orf41Q9Y2V0 281 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 ASB4Q9Y574 426 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 NINQ8N4C6 2090 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms