RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 COPS7AQ9UBW8 275 aa19.38■□□□□ 0.69
TOP3A-204ENST00000472959 MARCOQ9UEW3 520 aaPredicted RBP19.38■□□□□ 0.69
TOP3A-204ENST00000472959 GIMAP2Q9UG22 337 aa19.38■□□□□ 0.69
TOP3A-204ENST00000472959 EIF3LQ9Y262 564 aaKnown RBP19.38■□□□□ 0.69
TOP3A-204ENST00000472959 PDGFAP04085 211 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 ATP1B1P05026 303 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 KITP10721 976 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 ABHD17BQ5VST6 288 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 IL23RQ5VWK5 629 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 IGFL2Q6UWQ7 119 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 TICAM1Q8IUC6 712 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 LRRC25Q8N386 305 aaPredicted RBP19.37■□□□□ 0.69
TOP3A-204ENST00000472959 KIF2BQ8N4N8 673 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 AMER2Q8N7J2 671 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 CNRIP1Q96F85 164 aaPredicted RBP19.37■□□□□ 0.69
TOP3A-204ENST00000472959 ZNF764Q96H86 408 aaPredicted RBP19.37■□□□□ 0.69
TOP3A-204ENST00000472959 SENP5Q96HI0 755 aaPredicted RBP19.37■□□□□ 0.69
TOP3A-204ENST00000472959 EGLN2Q96KS0 407 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 PPP1R36Q96LQ0 422 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 ZNF354BQ96LW1 612 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 ZNF681Q96N22 645 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 DEFB126Q9BYW3 111 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 OR8D2Q9GZM6 311 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 EPS8L2Q9H6S3 715 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 CXorf21Q9HAI6 301 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 ASIC5Q9NY37 505 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 NOP53Q9NZM5 478 aaKnown RBP19.37■□□□□ 0.69
TOP3A-204ENST00000472959 ENTPD4Q9Y227 616 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 SCN2AQ99250 2005 aa19.37■□□□□ 0.69
TOP3A-204ENST00000472959 ATMQ13315 3056 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 IGSF10Q6WRI0 2623 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 TRBV11-1A0A0K0K1C0 115 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 DPM1O60762 260 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 ZFAND5O76080 213 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 DDX5P17844 614 aaKnown RBP19.36■□□□□ 0.69
TOP3A-204ENST00000472959 FEN1P39748 380 aaKnown RBP19.36■□□□□ 0.69
TOP3A-204ENST00000472959 ERVK-8P63133 956 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 ZNF750Q32MQ0 723 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 C6orf163Q5TEZ5 329 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 DGAT2L6Q6ZPD8 337 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 GALNT12Q8IXK2 581 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 OR8K3Q8NH51 312 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 ZNF721Q8TF20 911 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 EXOSC8Q96B26 276 aaKnown RBP19.36■□□□□ 0.69
TOP3A-204ENST00000472959 TSSK3Q96PN8 268 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 REEP4Q9H6H4 257 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.36■□□□□ 0.69
TOP3A-204ENST00000472959 STMN3Q9NZ72 180 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 BAIAP2L1Q9UHR4 511 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 EXO1Q9UQ84 846 aaKnown RBP19.36■□□□□ 0.69
TOP3A-204ENST00000472959 PIEZO2Q9H5I5 2752 aa19.36■□□□□ 0.69
TOP3A-204ENST00000472959 CHD6Q8TD26 2715 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 A0A1W2PS29 197 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 CDK2AP1O14519 115 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 TBX19O60806 448 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 IGKV3-11P04433 115 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 PCSK2P16519 638 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 LBPP18428 481 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 NT5EP21589 574 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 MPIP34949 423 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 ZNF267Q14586 743 aaPredicted RBP19.35■□□□□ 0.69
TOP3A-204ENST00000472959 CEBPEQ15744 281 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 MEP1AQ16819 746 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 ACER2Q5QJU3 275 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 B3GNTL1Q67FW5 361 aaPredicted RBP19.35■□□□□ 0.69
TOP3A-204ENST00000472959 HSDL2Q6YN16 418 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 LINC00696Q6ZRV3 163 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 LARP4Q71RC2 724 aaKnown RBP eCLIP19.35■□□□□ 0.69
TOP3A-204ENST00000472959 R3HCC1LQ7Z5L2 792 aaKnown RBP19.35■□□□□ 0.69
TOP3A-204ENST00000472959 RPS19BP1Q86WX3 136 aaKnown RBP19.35■□□□□ 0.69
TOP3A-204ENST00000472959 FAM9CQ8IZT9 166 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 ARMC10Q8N2F6 343 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 LIX1Q8N485 282 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 ZADH2Q8N4Q0 377 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 MTERF3Q96E29 417 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 BBS4Q96RK4 519 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 C1orf50Q9BV19 199 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 SLCO1B3Q9NPD5 702 aa19.35■□□□□ 0.69
TOP3A-204ENST00000472959 ZNF223Q9UK11 482 aaPredicted RBP19.35■□□□□ 0.69
TOP3A-204ENST00000472959 EIF4E1BA6NMX2 242 aaKnown RBP19.34■□□□□ 0.69
TOP3A-204ENST00000472959 SDHDO14521 159 aa19.34■□□□□ 0.69
TOP3A-204ENST00000472959 RPL3P39023 403 aaKnown RBP19.34■□□□□ 0.69
TOP3A-204ENST00000472959 MAP4K2Q12851 820 aa19.34■□□□□ 0.69
TOP3A-204ENST00000472959 OGFOD2Q6N063 350 aa19.34■□□□□ 0.69
TOP3A-204ENST00000472959 OR5L2Q8NGL0 311 aa19.34■□□□□ 0.69
TOP3A-204ENST00000472959 CLHC1Q8NHS4 586 aa19.34■□□□□ 0.69
TOP3A-204ENST00000472959 GFM2Q969S9 779 aaKnown RBP19.34■□□□□ 0.69
TOP3A-204ENST00000472959 PPCDCQ96CD2 204 aa19.34■□□□□ 0.69
TOP3A-204ENST00000472959 CNPPD1Q9BV87 410 aa19.34■□□□□ 0.69
TOP3A-204ENST00000472959 RNF32Q9H0A6 362 aa19.34■□□□□ 0.69
TOP3A-204ENST00000472959 ABI3Q9P2A4 366 aa19.34■□□□□ 0.69
TOP3A-204ENST00000472959 MAPRE3Q9UPY8 281 aa19.34■□□□□ 0.69
TOP3A-204ENST00000472959 MYO1GB0I1T2 1018 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 AKAP10O43572 662 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 LRATO95237 230 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 TGDSO95455 350 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 G6PDP11413 515 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 PRPS1L1P21108 318 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 HPCAL1P37235 193 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 FUT7Q11130 342 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms