RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 NUDT13Q86X67 352 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 DND1Q8IYX4 353 aaKnown RBP14.11□□□□□ -0.15
VTI1A-203ENST00000472892 ADGRG4Q8IZF6 3080 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 OR52B6Q8NGF0 335 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 LILRB4Q8NHJ6 448 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 DOK4Q8TEW6 326 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 PAQR8Q8TEZ7 354 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 ASB5Q8WWX0 329 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 RND1Q92730 232 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 RIT1Q92963 219 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 UCN3Q969E3 161 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 ATP6V1E2Q96A05 226 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 PHF21BQ96EK2 531 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 CDK15Q96Q40 435 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 SERPINI1Q99574 410 aa14.11□□□□□ -0.15
VTI1A-203ENST00000472892 SEMA4BQ9NPR2 832 aaPredicted RBP14.11□□□□□ -0.15
VTI1A-203ENST00000472892 TUBA8Q9NY65 449 aaPredicted RBP14.11□□□□□ -0.15
VTI1A-203ENST00000472892 BCKDKO14874 412 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 SUSD5O60279 629 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 OR10H2O60403 315 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 AIFM1O95831 613 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 CLPSP04118 112 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 FBXO45P0C2W1 286 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 SSTR2P30874 369 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 PIGAP37287 484 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 CCNG1P51959 295 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 HERVK_113P63132 956 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 ERVK-8P63133 956 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 PMPCAQ10713 525 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 C10orf62Q5T681 223 aaPredicted RBP14.1□□□□□ -0.15
VTI1A-203ENST00000472892 FRG2Q64ET8 278 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 RNF111Q6ZNA4 994 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 ACAD11Q709F0 780 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 SLC29A4Q7RTT9 530 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 RPRMLQ8N4K4 120 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 NOA1Q8NC60 698 aaKnown RBP14.1□□□□□ -0.15
VTI1A-203ENST00000472892 SPACA9Q96E40 222 aaPredicted RBP14.1□□□□□ -0.15
VTI1A-203ENST00000472892 C14orf79Q96F83 325 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 C16orf45Q96MC5 204 aaPredicted RBP14.1□□□□□ -0.15
VTI1A-203ENST00000472892 FRG2BQ96QU4 278 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 SMC6Q96SB8 1091 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 PAFAH2Q99487 392 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 CNPPD1Q9BV87 410 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 ERVK-6Q9BXR3 956 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 WWTR1Q9GZV5 400 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 WDR41Q9HAD4 459 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 ZBTB26Q9HCK0 441 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 PNPLA3Q9NST1 481 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 ZNF180Q9UJW8 692 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 PCTPQ9UKL6 214 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 ERVK-19Q9WJR5 959 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 RNF6Q9Y252 685 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 LIPGQ9Y5X9 500 aa14.1□□□□□ -0.15
VTI1A-203ENST00000472892 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.1□□□□□ -0.15
VTI1A-203ENST00000472892 OTOGQ6ZRI0 2925 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 ATP6AP2A0A1C7CYW4 349 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 OR6C76A6NM76 312 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 AQP7O14520 342 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 PGRMC2O15173 223 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 SMIM24O75264 130 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 ATP6AP2O75787 350 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 KRT38O76015 456 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 GBAP04062 536 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 CELA3AP09093 270 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 CNTFP26441 200 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 SERPINB3P29508 390 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 ECHS1P30084 290 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 CHRNB4P30926 498 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 TRAF3Q13114 568 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 EBPQ15125 230 aaKnown RBP14.09□□□□□ -0.15
VTI1A-203ENST00000472892 TSNAXIP1Q2TAA8 658 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 FBXW8Q8N3Y1 598 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 TMEM151AQ8N4L1 468 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 DCAKDQ8WVC6 231 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 IFT81Q8WYA0 676 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 NSUN5Q96P11 429 aaKnown RBP14.09□□□□□ -0.15
VTI1A-203ENST00000472892 MRPL57Q9BQC6 102 aaKnown RBP14.09□□□□□ -0.15
VTI1A-203ENST00000472892 CXorf21Q9HAI6 301 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 PROK2Q9HC23 129 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 AHSPQ9NZD4 102 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 CNIH4Q9P003 139 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 XPR1Q9UBH6 696 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 ADAM29Q9UKF5 820 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 CHCHD2Q9Y6H1 151 aaPredicted RBP14.09□□□□□ -0.15
VTI1A-203ENST00000472892 IKBKGQ9Y6K9 419 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 CACNA1CQ13936 2221 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 ZNF407Q9C0G0 2248 aa14.09□□□□□ -0.15
VTI1A-203ENST00000472892 HCN1O60741 890 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 TOXO94900 526 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 KLK1P06870 262 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 SBK3P0C264 359 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 IGFBP2P18065 325 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 ACVR2AP27037 513 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 ARL1P40616 181 aaPredicted RBP14.08□□□□□ -0.16
VTI1A-203ENST00000472892 NUP107P57740 925 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 TFF3Q07654 80 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 GGTA1PQ4G0N0 100 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 GLE1Q53GS7 698 aaKnown RBP14.08□□□□□ -0.16
VTI1A-203ENST00000472892 OR52E8Q6IFG1 317 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 MEX3BQ6ZN04 569 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms