RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 PAX2Q02962 417 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 PPP1R3AQ16821 1122 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 C14orf28Q4W4Y0 310 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 TATDN1Q6P1N9 297 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 KRT74Q7RTS7 529 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 CACUL1Q86Y37 369 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 TIGD4Q8IY51 512 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 ARL14Q8N4G2 192 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 ZNF491Q8N8L2 437 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 OR2L5Q8NG80 312 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 OCC1Q8TAD7 63 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 MGARPQ8TDB4 240 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 ANKRD49Q8WVL7 239 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 ZNF606Q8WXB4 792 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 FAF2Q96CS3 445 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 ST6GALNAC4Q9H4F1 302 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 LMAN1LQ9HAT1 526 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 AIPL1Q9NZN9 384 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 SEPT10Q9P0V9 454 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 ZNF319Q9P2F9 582 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 FBXL5Q9UKA1 691 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 ABCG2Q9UNQ0 655 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 TRAF3IP3Q9Y228 551 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 CCL27Q9Y4X3 112 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 N6AMT1Q9Y5N5 214 aa3.06□□□□□ -1.92
CD46-213ENST00000471987 ABCC9O60706 1549 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 FANCIQ9NVI1 1328 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 RNF212BA8MTL3 300 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 M0QX08 132 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 NDC80O14777 642 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 DKC1O60832 514 aaKnown RBP eCLIP3.05□□□□□ -1.92
CD46-213ENST00000471987 TBX10O75333 385 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 CALCAP01258 141 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 FCGR3AP08637 254 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 TSPY3P0CV98 308 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 TSPY8P0CW00 308 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 HSPA5P11021 654 aaKnown RBP3.05□□□□□ -1.92
CD46-213ENST00000471987 P4HA1P13674 534 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 OR3A1P47881 315 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 PTENP60484 403 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 TSPY1Q01534 308 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 MECOMQ03112 1051 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 CDO1Q16878 200 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 CELF3Q5SZQ8 465 aaKnown RBP3.05□□□□□ -1.92
CD46-213ENST00000471987 CCDC122Q5T0U0 273 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 ALKBH5Q6P6C2 394 aaKnown RBP3.05□□□□□ -1.92
CD46-213ENST00000471987 DZIP1Q86YF9 867 aaKnown RBP3.05□□□□□ -1.92
CD46-213ENST00000471987 FBXO16Q8IX29 292 aaPredicted RBP3.05□□□□□ -1.92
CD46-213ENST00000471987 DRAXINQ8NBI3 349 aaPredicted RBP3.05□□□□□ -1.92
CD46-213ENST00000471987 ZNF564Q8TBZ8 553 aaPredicted RBP3.05□□□□□ -1.92
CD46-213ENST00000471987 SEPT8Q92599 483 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 RIT1Q92963 219 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 VPS33AQ96AX1 596 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 CFAP36Q96G28 342 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 BAG1Q99933 345 aaPredicted RBP3.05□□□□□ -1.92
CD46-213ENST00000471987 ADPGKQ9BRR6 497 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 UTP14AQ9BVJ6 771 aaKnown RBP3.05□□□□□ -1.92
CD46-213ENST00000471987 FAM129AQ9BZQ8 928 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 DPEP3Q9H4B8 488 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 ELL3Q9HB65 397 aaPredicted RBP3.05□□□□□ -1.92
CD46-213ENST00000471987 FANCFQ9NPI8 374 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 ZNF446Q9NWS9 450 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 RCOR3Q9P2K3 495 aaPredicted RBP3.05□□□□□ -1.92
CD46-213ENST00000471987 NFKBIL1Q9UBC1 381 aaPredicted RBP3.05□□□□□ -1.92
CD46-213ENST00000471987 MTRRQ9UBK8 725 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 CFDP1Q9UEE9 299 aaPredicted RBP3.05□□□□□ -1.92
CD46-213ENST00000471987 GMEB2Q9UKD1 530 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 DUSP12Q9UNI6 340 aa3.05□□□□□ -1.92
CD46-213ENST00000471987 NOSIPQ9Y314 301 aaKnown RBP3.05□□□□□ -1.92
CD46-213ENST00000471987 BRD4O60885 1362 aaPredicted RBP3.04□□□□□ -1.92
CD46-213ENST00000471987 CCDC162PA2VCL2 907 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 CCSO14618 274 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 LETM1O95202 739 aaPredicted RBP3.04□□□□□ -1.92
CD46-213ENST00000471987 CD9P21926 228 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 HSPA1LP34931 641 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 CD86P42081 329 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 NDST1P52848 882 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 STX17P56962 302 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 CKAP4Q07065 602 aaKnown RBP3.04□□□□□ -1.92
CD46-213ENST00000471987 SYCP1Q15431 976 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 RABL6Q3YEC7 729 aaPredicted RBP3.04□□□□□ -1.92
CD46-213ENST00000471987 IQCCQ4KMZ1 466 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 LYPLAL1Q5VWZ2 237 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 SHEQ5VZ18 495 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 ZNF544Q6NX49 715 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 CNSTQ6PJW8 725 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 C2orf66Q6UXQ4 117 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 CCDC186Q7Z3E2 898 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 SPATA21Q7Z572 469 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 ANKRD46Q86W74 232 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 IQCA1Q86XH1 822 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 SMYD1Q8NB12 490 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 ST6GALNAC6Q969X2 333 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 CNDP2Q96KP4 475 aaKnown RBP3.04□□□□□ -1.92
CD46-213ENST00000471987 EBF4Q9BQW3 602 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 SLC39A3Q9BRY0 314 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 INPP5KQ9BT40 448 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 ZWILCHQ9H900 591 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 MED4Q9NPJ6 270 aa3.04□□□□□ -1.92
CD46-213ENST00000471987 MTF2Q9Y483 593 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms