RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 FEN1P39748 380 aaKnown RBP12.94□□□□□ -0.34
BRCA1-209ENST00000470026 ERVFC1P60507 584 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 ST8SIA6P61647 398 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 CNTN1Q12860 1018 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 COX10Q12887 443 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 LRRC26Q2I0M4 334 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 AGAP6Q5VW22 663 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 TMC5Q6UXY8 1006 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 ERN2Q76MJ5 926 aaKnown RBP12.94□□□□□ -0.34
BRCA1-209ENST00000470026 C12orf40Q86WS4 652 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 RBM45Q8IUH3 476 aaKnown RBP12.94□□□□□ -0.34
BRCA1-209ENST00000470026 CLIP4Q8N3C7 705 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 FAM181AQ8N9Y4 354 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 SLC7A13Q8TCU3 470 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 RAB8BQ92930 207 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 ZBED6CLQ96FA7 236 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-209ENST00000470026 TRMT61AQ96FX7 289 aaKnown RBP12.94□□□□□ -0.34
BRCA1-209ENST00000470026 AGAP4Q96P64 663 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 ZNF607Q96SK3 696 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 KCNS3Q9BQ31 491 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 POLDIP3Q9BY77 421 aaKnown RBP12.94□□□□□ -0.34
BRCA1-209ENST00000470026 POLR2J3Q9H1A7 115 aaKnown RBP12.94□□□□□ -0.34
BRCA1-209ENST00000470026 MIR1-1HGQ9H1L0 117 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 KLHL3Q9UH77 587 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 PLAGL1Q9UM63 463 aa12.94□□□□□ -0.34
BRCA1-209ENST00000470026 TCF20Q9UGU0 1960 aaKnown RBP12.93□□□□□ -0.34
BRCA1-209ENST00000470026 IQCMA0A1B0GVH7 501 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 TMPRSS11DO60235 418 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 SOX14O95416 240 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 CKMT1AP12532 417 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 ADRB3P13945 408 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 PSMA1P25786 263 aaKnown RBP12.93□□□□□ -0.34
BRCA1-209ENST00000470026 ITGB8P26012 769 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 SOX3P41225 446 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 DGKEP52429 567 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 KIAA1211LQ6NV74 962 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 CASP12Q6UXS9 341 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 UBE3DQ7Z6J8 389 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 ETFBKMTQ8IXQ9 262 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 SLC34A3Q8N130 599 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 CELF2-AS1Q8N7Q2 184 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 MRPL43Q8N983 215 aaKnown RBP12.93□□□□□ -0.34
BRCA1-209ENST00000470026 OR5K2Q8NHB8 316 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 TMCO6Q96DC7 493 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 LRRC3BQ96PB8 259 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 TREX2Q9BQ50 279 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-209ENST00000470026 CNPPD1Q9BV87 410 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 TSSK6Q9BXA6 273 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 SEMA3GQ9NS98 782 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 MRPS18AQ9NVS2 196 aaKnown RBP12.93□□□□□ -0.34
BRCA1-209ENST00000470026 TESQ9UGI8 421 aaKnown RBP12.93□□□□□ -0.34
BRCA1-209ENST00000470026 TAC3Q9UHF0 121 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 DIMT1Q9UNQ2 313 aaKnown RBP12.93□□□□□ -0.34
BRCA1-209ENST00000470026 PCDHGB2Q9Y5G2 931 aa12.93□□□□□ -0.34
BRCA1-209ENST00000470026 A0A1W2PPV9 198 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 KIAA0355O15063 1070 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 LGI1O95970 557 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 ADH5P11766 374 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 CSF2RAP15509 400 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 MAGP20916 626 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 RORCP51449 518 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 TRA2BP62995 288 aaKnown RBP12.92□□□□□ -0.34
BRCA1-209ENST00000470026 PSPHP78330 225 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 HTRA4P83105 476 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-209ENST00000470026 NDUFA9Q16795 377 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 HNRNPA1L2Q32P51 320 aaKnown RBP12.92□□□□□ -0.34
BRCA1-209ENST00000470026 COMTD1Q86VU5 262 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 PHC2Q8IXK0 858 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 TFGQ92734 400 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-209ENST00000470026 CEP19Q96LK0 163 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 PCBD2Q9H0N5 130 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 MVB12BQ9H7P6 319 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 DDX31Q9H8H2 851 aaKnown RBP12.92□□□□□ -0.34
BRCA1-209ENST00000470026 BCL2L10Q9HD36 194 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 CUEDC1Q9NWM3 386 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-209ENST00000470026 HCN2Q9UL51 889 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 GRIP1Q9Y3R0 1128 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 NINQ8N4C6 2090 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 SSX4O60224 188 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 MYCP01106 439 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-209ENST00000470026 CLTBP09497 229 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 BMPR1AP36894 532 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 CCT3P49368 545 aaKnown RBP12.92□□□□□ -0.34
BRCA1-209ENST00000470026 CCR8P51685 355 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 GAS1P54826 345 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 CDK5Q00535 292 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 HSPB3Q12988 150 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 ZNF79Q15937 498 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 CARTPTQ16568 116 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 ADAMTSL4Q6UY14 1074 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 DEF8Q6ZN54 512 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 NUDT13Q86X67 352 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 UBQLNLQ8IYU4 475 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 LINC00471Q8N535 108 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 C2orf73Q8N5S3 287 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-209ENST00000470026 TCEANCQ8N8B7 351 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 OR8D1Q8WZ84 308 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 NXPE3Q969Y0 559 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 ACAT2Q9BWD1 397 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 MCOLN1Q9GZU1 580 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms