RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 MAPK1P28482 360 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 CLCN2P51788 898 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 RPL38P63173 70 aaKnown RBP16.58■□□□□ 0.24
MRPL28-208ENST00000469744 MAT1AQ00266 395 aaKnown RBP16.58■□□□□ 0.24
MRPL28-208ENST00000469744 PWP1Q13610 501 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 DSG2Q14126 1118 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 SFT2D3Q587I9 215 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 SLC6A19Q695T7 634 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 SHISA5Q8N114 240 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 ICA1LQ8NDH6 482 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 OR11G2Q8NGC1 345 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 VPS33AQ96AX1 596 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 CMTM7Q96FZ5 175 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 METTL2AQ96IZ6 378 aaKnown RBP16.58■□□□□ 0.24
MRPL28-208ENST00000469744 SLC39A3Q9BRY0 314 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 SGPP1Q9BX95 441 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 ZNF552Q9H707 407 aaPredicted RBP16.58■□□□□ 0.24
MRPL28-208ENST00000469744 ZBTB20Q9HC78 741 aaPredicted RBP16.58■□□□□ 0.24
MRPL28-208ENST00000469744 ATP13A2Q9NQ11 1180 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 SEMA3GQ9NS98 782 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 MAGEA13PA6NCF6 341 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 IL6P05231 212 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 HTR1EP28566 365 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 BCL6P41182 706 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 HSPA13P48723 471 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 HNRNPFP52597 415 aaKnown RBP16.57■□□□□ 0.24
MRPL28-208ENST00000469744 EMP3P54852 163 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 MEF2AQ02078 507 aaPredicted RBP16.57■□□□□ 0.24
MRPL28-208ENST00000469744 RELAQ04206 551 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 AIMP2Q13155 320 aaKnown RBP16.57■□□□□ 0.24
MRPL28-208ENST00000469744 TIGD2Q4W5G0 525 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 PRSS41Q7RTY9 318 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 LILRA2Q8N149 483 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 Q8NA96 180 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 CPT1CQ8TCG5 803 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 SELENOMQ8WWX9 145 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 PKP2Q99959 881 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 DPY30Q9C005 99 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 PCBD2Q9H0N5 130 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 ELOVL6Q9H5J4 265 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 IL1RL2Q9HB29 575 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 CDC14AQ9UNH5 594 aa16.57■□□□□ 0.24
MRPL28-208ENST00000469744 USP9XQ93008 2570 aaPredicted RBP16.57■□□□□ 0.24
MRPL28-208ENST00000469744 IGLV3-12A0A075B6K2 115 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 LCMT2O60294 686 aaKnown RBP16.56■□□□□ 0.24
MRPL28-208ENST00000469744 SEC22BO75396 215 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 PDYNP01213 254 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 UMPSP11172 480 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 NPPBP16860 134 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 GSK3BP49841 420 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 RPS15AP62244 130 aaKnown RBP16.56■□□□□ 0.24
MRPL28-208ENST00000469744 CSTF3Q12996 717 aaKnown RBP16.56■□□□□ 0.24
MRPL28-208ENST00000469744 CAPRIN1Q14444 709 aaKnown RBP16.56■□□□□ 0.24
MRPL28-208ENST00000469744 GRAMD1BQ3KR37 738 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 GARNL3Q5VVW2 1013 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 FAAH2Q6GMR7 532 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 CAPN13Q6MZZ7 669 aaPredicted RBP16.56■□□□□ 0.24
MRPL28-208ENST00000469744 NANOGP8Q6NSW7 305 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 LCTLQ6UWM7 567 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 DLEU7Q6UYE1 221 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 OR8J3Q8NGG0 315 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 OR9A4Q8NGU2 314 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 OR56A3Q8NH54 315 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 ZCCHC10Q8TBK6 192 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 NACC2Q96BF6 587 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 MVB12AQ96EY5 273 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 FCRL1Q96LA6 429 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 OR4K3Q96R72 315 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 VCXQ9H320 206 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 COPS7BQ9H9Q2 264 aaPredicted RBP16.56■□□□□ 0.24
MRPL28-208ENST00000469744 NANOGQ9H9S0 305 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 FARSBQ9NSD9 589 aaKnown RBP16.56■□□□□ 0.24
MRPL28-208ENST00000469744 CCM2LQ9NUG4 571 aaPredicted RBP16.56■□□□□ 0.24
MRPL28-208ENST00000469744 GPRC5BQ9NZH0 403 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 SLC22A14Q9Y267 594 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 SNX13Q9Y5W8 968 aa16.56■□□□□ 0.24
MRPL28-208ENST00000469744 IDSB3KWA1 339 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 C9JVG2 144 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 TXNDC9O14530 226 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 ALPPP05187 535 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 GPIP06744 558 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 HSD3B1P14060 373 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 HRH2P25021 359 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 HSD3B2P26439 372 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 HNF4AP41235 474 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 CASP2P42575 452 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 UQCRFS1P47985 274 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 CLDN8P56748 225 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 LIPEQ05469 1076 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 Q0VFX4 171 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 E2F2Q14209 437 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 MSANTD1Q6ZTZ1 278 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 LIX1Q8N485 282 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 SLCO4A1Q96BD0 722 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 ACPTQ9BZG2 426 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 Q9H521 79 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 ALG2Q9H553 416 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 ZNF160Q9HCG1 818 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 SLAMF7Q9NQ25 335 aa16.55■□□□□ 0.24
MRPL28-208ENST00000469744 RAB26Q9ULW5 256 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms