RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 SERPIND1P05546 499 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 TPOP07202 933 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 STSP08842 583 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 ARRB2P32121 409 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 PTPN7P35236 360 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 SPRP35270 261 aaPredicted RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 SLC1A2P43004 574 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 NAGLUP54802 743 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 HTRA4P83105 476 aaPredicted RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 SERTAD2Q14140 314 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 PAFAH1B3Q15102 231 aaKnown RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 COL28A1Q2UY09 1125 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 PRAMEF13Q5VWM6 474 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 FSTL4Q6MZW2 842 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 SEZ6L2Q6UXD5 910 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 TMEM150AQ86TG1 271 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 ASPGQ86U10 573 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 GLCCI1Q86VQ1 547 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 OR8D4Q8NGM9 314 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 HMGB4Q8WW32 186 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 RLN3Q8WXF3 142 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 AP2M1Q96CW1 435 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 SIGLEC10Q96LC7 697 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 RBM4BQ9BQ04 359 aaKnown RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 WDR83Q9BRX9 315 aaKnown RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 RBM4Q9BWF3 364 aaKnown RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 ADGRE3Q9BY15 652 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 PRKD2Q9BZL6 878 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 C11orf54Q9H0W9 315 aaPredicted RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 ALG2Q9H553 416 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 SPHK2Q9NRA0 654 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 FAM212BQ9NTI7 297 aaPredicted RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 PADI2Q9Y2J8 665 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 TDRD15B5MCY1 1934 aaKnown RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 TBC1D3DA0A087WVF3 549 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 TBC1D3IA0A087WXS9 549 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 TBC1D3EA0A087X179 549 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 TBC1D3KA0A087X1G2 549 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 FAM95CA0A1B0GW59 222 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 TBC1D3FA6NER0 549 aaPredicted RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 TBC1D3LB9A6J9 549 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 CFDP00746 253 aaPredicted RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 TBC1D3HP0C7X1 549 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 ADH5P11766 374 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 C6P13671 934 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 PCMT1P22061 227 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 PAICSP22234 425 aaKnown RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 CD6P30203 668 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 SNTB1Q13884 538 aaKnown RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 DHCR24Q15392 516 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 ZNF542PQ5EBM4 170 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 TTC23Q5W5X9 447 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 TBC1D3GQ6DHY5 549 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 TBC1D3CQ6IPX1 549 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 Q6ZVL8 140 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 SPRED1Q7Z699 444 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 TRAPPC5Q8IUR0 188 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 TBC1D3Q8IZP1 549 aaPredicted RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 MS4A15Q8N5U1 240 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 CNIH3Q8TBE1 160 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 FGF14Q92915 247 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 C19orf60Q96EN9 201 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 MRGPRX2Q96LB1 330 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 GPR137Q96N19 417 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 LRRC3BQ96PB8 259 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 SDHCQ99643 169 aaPredicted RBP9.49□□□□□ -0.89
NUP50-214ENST00000469163 JAM3Q9BX67 310 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 RNF167Q9H6Y7 350 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 GALNT9Q9HCQ5 603 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 PISDQ9UG56 409 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 CA14Q9ULX7 337 aa9.49□□□□□ -0.89
NUP50-214ENST00000469163 UBXN8O00124 270 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 OIP5O43482 229 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 LEFTY1O75610 366 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 GP1BAP07359 652 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 SERPINA4P29622 427 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 FMO3P31513 532 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 ILF3Q12906 894 aaKnown RBP eCLIP9.48□□□□□ -0.89
NUP50-214ENST00000469163 KCNAB2Q13303 367 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 KRT33BQ14525 404 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 SMCO1Q147U7 214 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 SNAPC1Q16533 368 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 SOWAHCQ53LP3 525 aaPredicted RBP9.48□□□□□ -0.89
NUP50-214ENST00000469163 PABPC1L2AQ5JQF8 200 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 LIPNQ5VXI9 398 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 TGIF2LXQ8IUE1 241 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 STK40Q8N2I9 435 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 OR14C36Q8NHC7 312 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 KIAA1191Q96A73 305 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 YIPF6Q96EC8 236 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 KLF16Q9BXK1 252 aaPredicted RBP9.48□□□□□ -0.89
NUP50-214ENST00000469163 ALX4Q9H161 411 aaPredicted RBP9.48□□□□□ -0.89
NUP50-214ENST00000469163 IL21Q9HBE4 155 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 TMEM82A0PJX8 343 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 EFCAB10A6NFE3 127 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 SLCO1B7G3V0H7 640 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 HRO43593 1189 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 CREG1O75629 220 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 GADD45GO95257 159 aa9.48□□□□□ -0.89
NUP50-214ENST00000469163 PAPSS2O95340 614 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms