RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ZFAND4Q86XD8 727 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 MRPL41Q8IXM3 137 aaKnown RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 DAW1Q8N136 415 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SLC43A2Q8N370 569 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF561Q8N587 486 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SPICQ8N5J4 248 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 RTL3Q8N8U3 475 aaKnown RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 PCSK9Q8NBP7 692 aaKnown RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 C11orf65Q8NCR3 313 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SLC44A5Q8NCS7 719 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 GPR156Q8NFN8 814 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SPATA22Q8NHS9 363 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 DNAJB14Q8TBM8 379 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 METTL6Q8TCB7 284 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 CHURC1Q8WUH1 139 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ASZ1Q8WWH4 475 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 KCNJ9Q92806 393 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 FATE1Q969F0 183 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 FAM162AQ96A26 154 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 COQ8BQ96D53 544 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 PHYHIPLQ96FC7 376 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 FAM84BQ96KN1 310 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 C7orf34Q96L11 122 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 C3orf30Q96M34 536 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 KCTD7Q96MP8 289 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 FCRL3Q96P31 734 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 GPR78Q96P69 363 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ORAI3Q9BRQ5 295 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 CHCHD6Q9BRQ6 235 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 GINS4Q9BRT9 223 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 EDEM2Q9BV94 578 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ERVK-6Q9BXR3 956 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 NFKBIZQ9BYH8 718 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 BCL2L14Q9BZR8 327 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 OR51J1Q9H342 316 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 TMPRSS5Q9H3S3 457 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 RIBC2Q9H4K1 309 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SEBOXQ9HB31 216 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SLC52A3Q9NQ40 469 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ITM2CQ9NQX7 267 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 CLN6Q9NWW5 311 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 GDE1Q9NZC3 331 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SAE1Q9UBE0 346 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 METTL1Q9UBP6 276 aaKnown RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF222Q9UK12 451 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 IKZF3Q9UKT9 509 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 ACSL6Q9UKU0 697 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 OGDHLQ9ULD0 1010 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 POFUT2Q9Y2G5 429 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 TRPV2Q9Y5S1 764 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 AHDC1Q5TGY3 1603 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-207ENST00000468925 COL1A2P08123 1366 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SNED1Q8TER0 1413 aa4.63□□□□□ -1.67
SF3B1-207ENST00000468925 SBF2Q86WG5 1849 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 IGLV3-22A0A075B6J6 115 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ZCWPW2A0A1B0GU75 182 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 A0A1W2PQL4 384 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ARRDC5A6NEK1 342 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 C2CD4BA6NLJ0 364 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 A8MT66 165 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 A8MUA0 341 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 C1orf196B1AJZ1 125 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF879B4DU55 563 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 C5orf58C9J3I9 102 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 FAM86B1E9PN63 330 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 L7N2F9 121 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ARVCFO00192 962 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 CXCR6O00574 342 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 TNFRSF10CO14798 259 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PER2O15055 1255 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 SLC31A2O15432 143 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PCDHGA12O60330 932 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 NOBOXO60393 691 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PQBP1O60828 265 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 CRCPO75575 148 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ATG12O94817 140 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 OR4F21O95013 312 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 SERPINA3P01011 423 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 EPOP01588 193 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 APOC3P02656 99 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 RLN2P04090 185 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 TP53P04637 393 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 GIPP09681 153 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 HIST1H2AGP0C0S8 130 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 FAM86B2P0C5J1 330 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 UBBP0CG47 229 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 UBCP0CG48 685 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ERVK-10P10266 1014 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 UROSP10746 265 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 CYP4B1P13584 511 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 HGFP14210 728 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 NME1P15531 152 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 HIST1H2ADP20671 130 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 NFYAP23511 347 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 AKAP5P24588 427 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 CYP2F1P24903 491 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ATP5A1P25705 553 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PRDX5P30044 214 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 STAT5AP42229 794 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms