RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 ZBTB18Q99592 522 aa10.55□□□□□ -0.72
MSH5-214ENST00000468602 WDR77Q9BQA1 342 aaPredicted RBP10.55□□□□□ -0.72
MSH5-214ENST00000468602 CRB3Q9BUF7 120 aa10.55□□□□□ -0.72
MSH5-214ENST00000468602 DUSP26Q9BV47 211 aa10.55□□□□□ -0.72
MSH5-214ENST00000468602 ALOXE3Q9BYJ1 711 aa10.55□□□□□ -0.72
MSH5-214ENST00000468602 SEMA4CQ9C0C4 833 aa10.55□□□□□ -0.72
MSH5-214ENST00000468602 GPN2Q9H9Y4 310 aaPredicted RBP10.55□□□□□ -0.72
MSH5-214ENST00000468602 CXorf21Q9HAI6 301 aa10.55□□□□□ -0.72
MSH5-214ENST00000468602 GIMAP4Q9NUV9 329 aa10.55□□□□□ -0.72
MSH5-214ENST00000468602 PTRH2Q9Y3E5 179 aaKnown RBP10.55□□□□□ -0.72
MSH5-214ENST00000468602 HS3ST3B1Q9Y662 390 aa10.55□□□□□ -0.72
MSH5-214ENST00000468602 ZNF780BQ9Y6R6 833 aa10.55□□□□□ -0.72
MSH5-214ENST00000468602 ZZEF1O43149 2961 aa10.55□□□□□ -0.72
MSH5-214ENST00000468602 IGHV1-45A0A0A0MS14 117 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 BBIP1A8MTZ0 92 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 FCHO1O14526 889 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 CFLARO15519 480 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 PDPK1O15530 556 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 B4GALT2O60909 372 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 LDB3O75112 727 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 BCAS2O75934 225 aaPredicted RBP10.54□□□□□ -0.72
MSH5-214ENST00000468602 SOX30O94993 753 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 COX7A2P14406 83 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 LIFP15018 202 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 NCF2P19878 526 aaPredicted RBP10.54□□□□□ -0.72
MSH5-214ENST00000468602 S1PR1P21453 382 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 TRPC1P48995 793 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 TXNL4AP83876 142 aaKnown RBP10.54□□□□□ -0.72
MSH5-214ENST00000468602 STX4Q12846 297 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 SLC13A2Q13183 592 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 ERV3-1Q14264 604 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 KRT72Q14CN4 511 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 FAM174BQ3ZCQ3 159 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 ZNF628Q5EBL2 1059 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 SPANXN4Q5MJ08 99 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 EXOSC6Q5RKV6 272 aaKnown RBP10.54□□□□□ -0.72
MSH5-214ENST00000468602 LRIF1Q5T3J3 769 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 FHL5Q5TD97 284 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 AP1ARQ63HQ0 302 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 KIRREL2Q6UWL6 708 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 CPEB2Q7Z5Q1 589 aaKnown RBP10.54□□□□□ -0.72
MSH5-214ENST00000468602 PPP1R32Q7Z5V6 425 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 MTDHQ86UE4 582 aaKnown RBP10.54□□□□□ -0.72
MSH5-214ENST00000468602 RAB43Q86YS6 212 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 MMP21Q8N119 569 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 OR7A2PQ8NGA2 310 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 OR14A16Q8NHC5 309 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 ZFP28Q8NHY6 868 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 PTPMT1Q8WUK0 201 aaPredicted RBP10.54□□□□□ -0.72
MSH5-214ENST00000468602 KCNE4Q8WWG9 221 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 METTL21AQ8WXB1 218 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 DAZLQ92904 295 aaKnown RBP10.54□□□□□ -0.72
MSH5-214ENST00000468602 UCN3Q969E3 161 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 KLHL29Q96CT2 875 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 RBM18Q96H35 190 aaKnown RBP10.54□□□□□ -0.72
MSH5-214ENST00000468602 ART5Q96L15 291 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 TUBB6Q9BUF5 446 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 SLC25A23Q9BV35 468 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 TRIM4Q9C037 500 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 FAM107BQ9H098 131 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 GLIPR2Q9H4G4 154 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 PRM3Q9NNZ6 103 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 SLAMF7Q9NQ25 335 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 SERHLQ9NQF3 203 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 PTGFRNQ9P2B2 879 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 ENTPD4Q9Y227 616 aa10.54□□□□□ -0.72
MSH5-214ENST00000468602 NUP214P35658 2090 aaPredicted RBP10.54□□□□□ -0.72
MSH5-214ENST00000468602 SCN2AQ99250 2005 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 SAGE2PA6NJ88 616 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 GLOD5A6NK44 160 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 TTC36A6NLP5 189 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 ZNF891A8MT65 544 aaPredicted RBP10.53□□□□□ -0.72
MSH5-214ENST00000468602 RRP9O43818 475 aaKnown RBP10.53□□□□□ -0.72
MSH5-214ENST00000468602 PRKRAO75569 313 aaKnown RBP10.53□□□□□ -0.72
MSH5-214ENST00000468602 HPP00738 406 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 SNRPB2P08579 225 aaKnown RBP10.53□□□□□ -0.72
MSH5-214ENST00000468602 COX6A1P12074 109 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 ICAM2P13598 275 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 MAOAP21397 527 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 PTPN6P29350 595 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 NTSP30990 170 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 S100A3P33764 101 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 UCNP55089 124 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 AP2B1P63010 937 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 PSPHP78330 225 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 PCOLCEQ15113 449 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 TGIF1Q15583 401 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 MINDY4Q4G0A6 757 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 RIPOR1Q6ZS17 1223 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 NDUFAF7Q7L592 441 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 MRGPREQ86SM8 312 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 PROSER1Q86XN7 944 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 OR2L13Q8N349 312 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 C17orf47Q8NEP4 570 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 OR7G1Q8NGA0 311 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 OR11G2Q8NGC1 345 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 OR9I1Q8NGQ6 314 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 CLHC1Q8NHS4 586 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 M1APQ8TC57 530 aa10.53□□□□□ -0.72
MSH5-214ENST00000468602 SFXN5Q8TD22 340 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms