RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 CCDC3Q9BQI4 270 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 EFCAB11Q9BUY7 163 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 OR51B5Q9H339 312 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 TUBB1Q9H4B7 451 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 PELI2Q9HAT8 420 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 KCNK13Q9HB14 408 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 TMEM9BQ9NQ34 198 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 STARD5Q9NSY2 213 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 TMEM184CQ9NVA4 438 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 SOHLH2Q9NX45 425 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 PSD3Q9NYI0 1048 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 TMEM9Q9P0T7 183 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 HEY2Q9UBP5 337 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 ZDHHC8Q9ULC8 765 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 SNX7Q9UNH6 387 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 SNX6Q9UNH7 406 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC12A4Q9UP95 1085 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 STK38LQ9Y2H1 464 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 ARL2BPQ9Y2Y0 163 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 ENTPD2Q9Y5L3 495 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 DNAJC15Q9Y5T4 150 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 ZFC3H1O60293 1989 aaKnown RBP3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 KMT2EQ8IZD2 1858 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 TMEM131Q92545 1883 aa3.88□□□□□ -1.79
TMEM39A-204ENST00000468545 KNL1Q8NG31 2342 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 BDP1A6H8Y1 2624 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 KCNE1BA0A087WTH5 132 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 IGHV5-51A0A0C4DH38 117 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 IGKV1-8A0A0C4DH67 115 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 LY6G6EA0A0G2JKS1 128 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 A0A0G2JN53 185 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 ARHGAP10A1A4S6 786 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 GAGE12BA1L429 117 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 EME2A4GXA9 379 aaPredicted RBP3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 GAGE12HA6NDE8 117 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 LILRA5A6NI73 299 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 SRRM3A6NNA2 597 aaPredicted RBP3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 MAGEB17A8MXT2 336 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 AHRRA9YTQ3 701 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 H0YGG7 62 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 RTCAO00442 366 aaKnown RBP3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 SDHDO14521 159 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF195O14628 629 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 FLRT2O43155 660 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 RGS14O43566 566 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 NUDT21O43809 227 aaKnown RBP3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 DUX1O43812 170 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 MYO1DO94832 1006 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 AGFG2O95081 481 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 C9P02748 559 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 GBAP04062 536 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 HRGP04196 525 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 CKMT1AP12532 417 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 CD59P13987 128 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 ST6GAL1P15907 406 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 CKMT2P17540 419 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 LBPP18428 481 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 NBL1P41271 181 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 CASP2P42575 452 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 GRK6P43250 576 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 RAP1GDS1P52306 607 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 VSX2P58304 361 aaPredicted RBP3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 RAB8AP61006 207 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 ARF3P61204 181 aaPredicted RBP3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 PHEXP78562 749 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 REEP5Q00765 189 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 CFHR1Q03591 330 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 KCNAB1Q14722 419 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 RPS6KA2Q15349 733 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 TBCCQ15814 346 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 ZIC1Q15915 447 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC5A12Q1EHB4 618 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 AP5B1Q2VPB7 878 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 DEFB110Q30KQ9 67 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 LSM12Q3MHD2 195 aaKnown RBP3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 ATP6AP1LQ52LC2 224 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 TOR1AIP1Q5JTV8 583 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 STPG1Q5TH74 334 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 FRG2Q64ET8 278 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 TMEM198Q66K66 360 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 TMEM71Q6P5X7 295 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 TMIGD1Q6UXZ0 262 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 Q6ZSR9 355 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 DGLUCYQ7Z3D6 616 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 SPRED1Q7Z699 444 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 GGNQ86UU5 652 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 PAQR7Q86WK9 346 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 PPP1R3BQ86XI6 285 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 NAXDQ8IW45 347 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 KIAA2013Q8IYS2 634 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 FNDC5Q8NAU1 212 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 MFSD9Q8NBP5 474 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 DEFB124Q8NES8 71 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 ABHD11Q8NFV4 315 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 OR7G3Q8NG95 312 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 OR6C4Q8NGE1 309 aa3.87□□□□□ -1.79
TMEM39A-204ENST00000468545 OR56A1Q8NGH5 318 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms