RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 FBXW4P57775 412 aa17.04■□□□□ 0.32
LINC00888-201ENST00000468380 DOC2AQ14183 400 aa17.04■□□□□ 0.32
LINC00888-201ENST00000468380 TSNQ15631 228 aaKnown RBP17.04■□□□□ 0.32
LINC00888-201ENST00000468380 SPANXN3Q5MJ09 141 aa17.04■□□□□ 0.32
LINC00888-201ENST00000468380 BBOF1Q8ND07 529 aa17.04■□□□□ 0.32
LINC00888-201ENST00000468380 PPP1R14CQ8TAE6 165 aa17.04■□□□□ 0.32
LINC00888-201ENST00000468380 ZPLD1Q8TCW7 415 aa17.04■□□□□ 0.32
LINC00888-201ENST00000468380 ABTB1Q969K4 478 aaPredicted RBP17.04■□□□□ 0.32
LINC00888-201ENST00000468380 ESAMQ96AP7 390 aa17.04■□□□□ 0.32
LINC00888-201ENST00000468380 NTNG2Q96CW9 530 aa17.04■□□□□ 0.32
LINC00888-201ENST00000468380 PERPQ96FX8 193 aa17.04■□□□□ 0.32
LINC00888-201ENST00000468380 CERS2Q96G23 380 aa17.04■□□□□ 0.32
LINC00888-201ENST00000468380 RILPQ96NA2 401 aa17.04■□□□□ 0.32
LINC00888-201ENST00000468380 TBCDQ9BTW9 1192 aa17.04■□□□□ 0.32
LINC00888-201ENST00000468380 WWTR1Q9GZV5 400 aa17.04■□□□□ 0.32
LINC00888-201ENST00000468380 EIF3LQ9Y262 564 aaKnown RBP17.04■□□□□ 0.32
LINC00888-201ENST00000468380 NCF1BA6NI72 391 aaPredicted RBP17.03■□□□□ 0.32
LINC00888-201ENST00000468380 NCF1CA8MVU1 366 aaPredicted RBP17.03■□□□□ 0.32
LINC00888-201ENST00000468380 DEFB108AA8MXU0 73 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 ERN1O75460 977 aaKnown RBP17.03■□□□□ 0.32
LINC00888-201ENST00000468380 TTC4O95801 387 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 NCF1P14598 390 aaPredicted RBP17.03■□□□□ 0.32
LINC00888-201ENST00000468380 HPDP32754 393 aaPredicted RBP17.03■□□□□ 0.32
LINC00888-201ENST00000468380 SLC37A1P57057 533 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 HERVK_113P63132 956 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 ERVK-8P63133 956 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 TGM3Q08188 693 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 ZNF267Q14586 743 aaPredicted RBP17.03■□□□□ 0.32
LINC00888-201ENST00000468380 EBPQ15125 230 aaKnown RBP17.03■□□□□ 0.32
LINC00888-201ENST00000468380 TBCELQ5QJ74 424 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 RNASEH2BQ5TBB1 312 aaKnown RBP17.03■□□□□ 0.32
LINC00888-201ENST00000468380 TRMT10BQ6PF06 316 aaKnown RBP17.03■□□□□ 0.32
LINC00888-201ENST00000468380 SPPL2AQ8TCT8 520 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 TMEM79Q9BSE2 394 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 SORBS1Q9BX66 1292 aaKnown RBP17.03■□□□□ 0.32
LINC00888-201ENST00000468380 ERVK-6Q9BXR3 956 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 MS4A8Q9BY19 250 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 ANGPTL4Q9BY76 406 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 EHD1Q9H4M9 534 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 GPRC5BQ9NZH0 403 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 ERVK-19Q9WJR5 959 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 C15orf41Q9Y2V0 281 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 TESMINQ9Y4I5 508 aa17.03■□□□□ 0.32
LINC00888-201ENST00000468380 IQANK1A0A1B0GTG1 560 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 A8MXE2 369 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 CES2O00748 559 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 CRLF1O75462 422 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 PRKRAO75569 313 aaKnown RBP17.02■□□□□ 0.32
LINC00888-201ENST00000468380 SCELO95171 688 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 RCBTB2O95199 551 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 HIST1H1TP22492 207 aaPredicted RBP17.02■□□□□ 0.32
LINC00888-201ENST00000468380 CPA2P48052 419 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 CBLBQ13191 982 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 ACKR1Q16570 336 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 C18orf63Q68DL7 685 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 SLC29A4Q7RTT9 530 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 PPIL6Q8IXY8 311 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 NKAPQ8N5F7 415 aaKnown RBP17.02■□□□□ 0.32
LINC00888-201ENST00000468380 ZNF441Q8N8Z8 693 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 ZNF473Q8WTR7 871 aaKnown RBP17.02■□□□□ 0.32
LINC00888-201ENST00000468380 INTS12Q96CB8 462 aaKnown RBP17.02■□□□□ 0.32
LINC00888-201ENST00000468380 WDR34Q96EX3 536 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 PTCD3Q96EY7 689 aaKnown RBP17.02■□□□□ 0.32
LINC00888-201ENST00000468380 WFIKKN1Q96NZ8 548 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 TUBA1CQ9BQE3 449 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 SFXN3Q9BWM7 321 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 CAPS2Q9BXY5 557 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 ROGDIQ9GZN7 287 aa17.02■□□□□ 0.32
LINC00888-201ENST00000468380 RPF2Q9H7B2 306 aaKnown RBP17.02■□□□□ 0.32
LINC00888-201ENST00000468380 PPANQ9NQ55 473 aaKnown RBP17.02■□□□□ 0.32
LINC00888-201ENST00000468380 CORO1CQ9ULV4 474 aaPredicted RBP17.02■□□□□ 0.32
LINC00888-201ENST00000468380 ROS1P08922 2347 aa17.02■□□□□ 0.31
LINC00888-201ENST00000468380 MED12LQ86YW9 2145 aa17.02■□□□□ 0.31
LINC00888-201ENST00000468380 DSCAMO60469 2012 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 SAP18O00422 153 aaKnown RBP17.01■□□□□ 0.31
LINC00888-201ENST00000468380 CTIFO43310 598 aaKnown RBP17.01■□□□□ 0.31
LINC00888-201ENST00000468380 SNX4O95219 450 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 CNOT4O95628 575 aaKnown RBP17.01■□□□□ 0.31
LINC00888-201ENST00000468380 ALOX15P16050 662 aaPredicted RBP17.01■□□□□ 0.31
LINC00888-201ENST00000468380 EPORP19235 508 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 CASP3P42574 277 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 RPL21P46778 160 aaKnown RBP17.01■□□□□ 0.31
LINC00888-201ENST00000468380 FAM27E3Q08E93 113 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 SLAMF1Q13291 335 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 TOMM20Q15388 145 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 HP1BP3Q5SSJ5 553 aaPredicted RBP17.01■□□□□ 0.31
LINC00888-201ENST00000468380 CCDC137Q6PK04 289 aaKnown RBP17.01■□□□□ 0.31
LINC00888-201ENST00000468380 RNF111Q6ZNA4 994 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 ADGRE4PQ86SQ3 457 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 YRDCQ86U90 279 aaKnown RBP17.01■□□□□ 0.31
LINC00888-201ENST00000468380 SRFBP1Q8NEF9 429 aaKnown RBP17.01■□□□□ 0.31
LINC00888-201ENST00000468380 MS4A14Q96JA4 679 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 ART5Q96L15 291 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 DNAJC11Q9NVH1 559 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 TEX10Q9NXF1 929 aaPredicted RBP17.01■□□□□ 0.31
LINC00888-201ENST00000468380 CTNNAL1Q9UBT7 734 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 NDRG3Q9UGV2 375 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 WIF1Q9Y5W5 379 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 PSAT1Q9Y617 370 aa17.01■□□□□ 0.31
LINC00888-201ENST00000468380 SPACA6W5XKT8 324 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms