RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 LYSMD1Q96S90 227 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 TRIM2Q9C040 744 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 ZNF696Q9H7X3 374 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 KCNK12Q9HB15 430 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 DCAF13Q9NV06 445 aaKnown RBP13.13□□□□□ -0.31
BRAT1-203ENST00000467558 MCUBQ9NWR8 336 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 ACTR10Q9NZ32 417 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 CLEC4EQ9ULY5 219 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 NUMBLQ9Y6R0 609 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 HSPE1-MOB4S4R3N1 261 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 PRSS38A1L453 326 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 PLOD3O60568 738 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 ZNF12P17014 697 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 LHCGRP22888 699 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 IMPA1P29218 277 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 HLCSP50747 726 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 CTBSQ01459 385 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 USP53Q70EK8 1073 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 SERINC2Q96SA4 455 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 IL21Q9HBE4 155 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 TCF7L1Q9HCS4 588 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 RPRD1BQ9NQG5 326 aaKnown RBP13.13□□□□□ -0.31
BRAT1-203ENST00000467558 OR7A17O14581 309 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 HLA-DPB1P04440 258 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 AK4P27144 223 aaPredicted RBP13.13□□□□□ -0.31
BRAT1-203ENST00000467558 DNASE1L1P49184 302 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 CRISP1P54107 249 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 SHC2P98077 582 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 ST3GAL4Q11206 333 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 BNIP3Q12983 259 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 NFATC4Q14934 902 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 METTL25Q8N6Q8 603 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 L3MBTL4Q8NA19 623 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 PROKR2Q8NFJ6 384 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 OR5K2Q8NHB8 316 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 CNDP2Q96KP4 475 aaKnown RBP13.13□□□□□ -0.31
BRAT1-203ENST00000467558 UHRF1Q96T88 793 aaPredicted RBP13.13□□□□□ -0.31
BRAT1-203ENST00000467558 P2RY12Q9H244 342 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 GORASP2Q9H8Y8 452 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 TRIM36Q9NQ86 728 aa13.13□□□□□ -0.31
BRAT1-203ENST00000467558 PCGF2P35227 344 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 SELENOWP63302 87 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 DSG2Q14126 1118 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 TSTQ16762 297 aaKnown RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 DNM1P34Q6PK57 102 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 Q6ZSR9 355 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 GHDCQ8N2G8 530 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 LRRC17Q8N6Y2 441 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 ACOT4Q8N9L9 421 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 CNIH3Q8TBE1 160 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 GAL3ST3Q96A11 431 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 GPER1Q99527 375 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 KCNS3Q9BQ31 491 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 INTS6Q9UL03 887 aaKnown RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 TCRBV3S1A0A5B6 114 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 I6L893 689 aaPredicted RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 HEXBP07686 556 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 CPOXP36551 454 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 DCTP40126 519 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 EIF2DP41214 584 aaKnown RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 IST1P53990 364 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 ZXDBP98169 803 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 MLLT1Q03111 559 aaPredicted RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 TAP2Q03519 686 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 SLC36A3Q495N2 470 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 ANKRD54Q6NXT1 300 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 TMEM207Q6UWW9 146 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 MAVSQ7Z434 540 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 TRIM73Q86UV7 250 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 DCP2Q8IU60 420 aaKnown RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 OR4K17Q8NGC6 315 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 SMPDL3BQ92485 455 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 ACTRT3Q9BYD9 372 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 AP1M2Q9Y6Q5 423 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 FABP12A6NFH5 140 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 FOXE1O00358 373 aaPredicted RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 SSNA1O43805 119 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 F3P13726 295 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 FOSL2P15408 326 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 TRA2BP62995 288 aaKnown RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 LIN54Q6MZP7 749 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 ADAMTSL4Q6UY14 1074 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 TSPYL5Q86VY4 417 aaPredicted RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 MAELQ96JY0 434 aaKnown RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 ZSWIM3Q96MP5 696 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 MTHFD2LQ9H903 347 aaPredicted RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 EPHA6Q9UF33 1036 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 MKLN1Q9UL63 735 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 BLOC1S5-TXNDC5H3BN57 136 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 UBFD1O14562 309 aaKnown RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 KHNYNO15037 678 aaKnown RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 SLCO2B1O94956 709 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 DBIP07108 87 aaKnown RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 HK1P19367 917 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 MC1RQ01726 317 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 FAM180BQ6P0A1 224 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 TTLL10Q6ZVT0 673 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 ZNF761Q86XN6 746 aaPredicted RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 ZNF676Q8N7Q3 588 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 TMEM203Q969S6 136 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms