RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 REPS1Q96D71 796 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 MFSD3Q96ES6 412 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 SENP5Q96HI0 755 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-203ENST00000467533 ZNF845Q96IR2 970 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-203ENST00000467533 CCDC42Q96M95 316 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 DGAT2Q96PD7 388 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 OR4K3Q96R72 315 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 AIF1LQ9BQI0 150 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 TMEM204Q9BSN7 226 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 G6PC3Q9BUM1 346 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 PARVBQ9HBI1 364 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.27□□□□□ -0.93
HDAC3-203ENST00000467533 KLHL42Q9P2K6 505 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 DHRS7Q9Y394 339 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 DYRK1BQ9Y463 629 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 MED12Q93074 2177 aa9.27□□□□□ -0.93
HDAC3-203ENST00000467533 A0A1W2PP18 115 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 CTAGE9A4FU28 777 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 FRG2CA6NGY1 282 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 CAPN14A8MX76 684 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 EIF3FO00303 357 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-203ENST00000467533 CLOCKO15516 846 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 DLX3O60479 287 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 C8GP07360 202 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 HIST1H2AGP0C0S8 130 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-203ENST00000467533 ITGA2P17301 1181 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 HIST1H2ADP20671 130 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 TBXA2RP21731 343 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 PTPN6P29350 595 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 HNRNPH1P31943 449 aaKnown RBP9.26□□□□□ -0.93
HDAC3-203ENST00000467533 NUDT6P53370 316 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 PLA2G16P53816 162 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 UBASH3AP57075 661 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 FBXW4P57775 412 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 DHX9Q08211 1270 aaKnown RBP9.26□□□□□ -0.93
HDAC3-203ENST00000467533 LOXL1Q08397 574 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-203ENST00000467533 GPS1Q13098 491 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 SP140Q13342 867 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 EXOC3L2Q2M3D2 409 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 FAM120AOSQ5T036 256 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 DUPD1Q68J44 220 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 LRRC8EQ6NSJ5 796 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 TRIM40Q6P9F5 258 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 CLEC2AQ6UVW9 174 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 SBSNQ6UWP8 590 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 ANGPTL8Q6UXH0 198 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 TMEM64Q6YI46 380 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 CENPUQ71F23 418 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 KLHDC8AQ8IYD2 350 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 TAGAPQ8N103 731 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 OR1J4Q8NGS1 313 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 SPPL2AQ8TCT8 520 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 MS4A6EQ96DS6 147 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 TMEM41AQ96HV5 264 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 LCORQ96JN0 433 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-203ENST00000467533 HIST1H2AHQ96KK5 128 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 SERINC2Q96SA4 455 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 HIST1H2AJQ99878 128 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 H2AFJQ9BTM1 129 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 WWTR1Q9GZV5 400 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 IL22Q9GZX6 179 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 NHEJ1Q9H9Q4 299 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-203ENST00000467533 PELI2Q9HAT8 420 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 RAB6BQ9NRW1 208 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 INTS10Q9NVR2 710 aaKnown RBP9.26□□□□□ -0.93
HDAC3-203ENST00000467533 FETUBQ9UGM5 382 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 DAPP1Q9UN19 280 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 DTX4Q9Y2E6 619 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 MED16Q9Y2X0 877 aa9.26□□□□□ -0.93
HDAC3-203ENST00000467533 UQCRHLA0A096LP55 91 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 HRKO00198 91 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 HCRTR2O43614 444 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 KIAA0513O60268 411 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 ABCB7O75027 752 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 IFNB1P01574 187 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 IGKV3-11P04433 115 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 DANCRP0C864 163 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 IGHV4-31P0DP07 118 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 PPP3CBP16298 524 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 SLC6A12P48065 614 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 STARP49675 285 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 TMED10P49755 219 aaKnown RBP9.25□□□□□ -0.93
HDAC3-203ENST00000467533 RWDD2BP57060 319 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 RPP38P78345 283 aaKnown RBP9.25□□□□□ -0.93
HDAC3-203ENST00000467533 DEFA6Q01524 100 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 TIGD3Q6B0B8 471 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 ZNF470Q6ECI4 717 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 FAM166AQ6J272 317 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 ALKBH2Q6NS38 261 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 RNF111Q6ZNA4 994 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 CHMP1BQ7LBR1 199 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 IFNEQ86WN2 208 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 TRIM42Q8IWZ5 723 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 MYO1HQ8N1T3 1032 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 RFLNBQ8N5W9 214 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 ZNF610Q8N9Z0 462 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 OR56A3Q8NH54 315 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 RAB3IL1Q8TBN0 382 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 RDH11Q8TC12 318 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 SMAP2Q8WU79 429 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms