RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ADGRD1Q6QNK2 874 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 CYP20A1Q6UW02 462 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 LYPD8Q6UX82 237 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 B3GNT6Q6ZMB0 384 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 RNF111Q6ZNA4 994 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 SLC29A4Q7RTT9 530 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 GOLGA7Q7Z5G4 137 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 FAM13CQ8NE31 585 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 PAQR8Q8TEZ7 354 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 SARAFQ96BY9 339 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 TTYH2Q9BSA4 534 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 IPPKQ9H8X2 491 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 SH2D2AQ9NP31 389 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 BOKQ9UMX3 212 aaPredicted RBP17.66■□□□□ 0.42
COL9A3-206ENST00000466532 ASB4Q9Y574 426 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 TRGV5A0A0B4J1U4 118 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 A0A1W2PR48 441 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 WASHC1A8K0Z3 465 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 TMPRSS11DO60235 418 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 HCN1O60741 890 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 WDR1O75083 606 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 SIX3O95343 332 aaPredicted RBP17.65■□□□□ 0.42
COL9A3-206ENST00000466532 FAM58BPP0C7Q3 252 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 GLI4P10075 376 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 NR2F6P10588 404 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 PIK3CGP48736 1102 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 SERPINB8P50452 374 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 ETF1P62495 437 aaKnown RBP17.65■□□□□ 0.42
COL9A3-206ENST00000466532 SLC7A5Q01650 507 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 TBL3Q12788 808 aaKnown RBP17.65■□□□□ 0.42
COL9A3-206ENST00000466532 CUL3Q13618 768 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 WLSQ5T9L3 541 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 RTL6Q6ICC9 239 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 MRM1Q6IN84 353 aaKnown RBP17.65■□□□□ 0.42
COL9A3-206ENST00000466532 SYT10Q6XYQ8 523 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 DMRTC2Q8IXT2 367 aaPredicted RBP17.65■□□□□ 0.42
COL9A3-206ENST00000466532 DND1Q8IYX4 353 aaKnown RBP17.65■□□□□ 0.42
COL9A3-206ENST00000466532 C17orf53Q8N3J3 647 aaPredicted RBP17.65■□□□□ 0.42
COL9A3-206ENST00000466532 FBXW8Q8N3Y1 598 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 WDR20Q8TBZ3 569 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 RIT1Q92963 219 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 WWTR1Q9GZV5 400 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 DDX31Q9H8H2 851 aaKnown RBP17.65■□□□□ 0.42
COL9A3-206ENST00000466532 WDR41Q9HAD4 459 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 RNF11Q9Y3C5 154 aa17.65■□□□□ 0.42
COL9A3-206ENST00000466532 TNPO3Q9Y5L0 923 aaKnown RBP17.65■□□□□ 0.42
COL9A3-206ENST00000466532 AIFM1O95831 613 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 FBXO45P0C2W1 286 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 RFPL3SP0C7P2 107 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 SERPINB3P29508 390 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 TYK2P29597 1187 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 ARL1P40616 181 aaPredicted RBP17.64■□□□□ 0.41
COL9A3-206ENST00000466532 ZFP36L2P47974 494 aaKnown RBP17.64■□□□□ 0.41
COL9A3-206ENST00000466532 NEK2P51955 445 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 SLC37A1P57057 533 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 EBPQ15125 230 aaKnown RBP17.64■□□□□ 0.41
COL9A3-206ENST00000466532 NUDT13Q86X67 352 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 L3MBTL4Q8NA19 623 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 OR10G3Q8NGC4 313 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 GPR78Q96P69 363 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 VPS11Q9H270 941 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 ZNF703Q9H7S9 590 aaPredicted RBP17.64■□□□□ 0.41
COL9A3-206ENST00000466532 ZFP64Q9NPA5 681 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 ALKBH4Q9NXW9 302 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 PSD3Q9NYI0 1048 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 CNIH4Q9P003 139 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 SPRR3Q9UBC9 169 aa17.64■□□□□ 0.41
COL9A3-206ENST00000466532 CHCHD2Q9Y6H1 151 aaPredicted RBP17.64■□□□□ 0.41
COL9A3-206ENST00000466532 HIVEP1P15822 2718 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 A0A0G2JNJ9 132 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 OR6C76A6NM76 312 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 CLDN9O95484 217 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 GBAP04062 536 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 ALDOAP04075 364 aaKnown RBP17.63■□□□□ 0.41
COL9A3-206ENST00000466532 HOXD4P09016 255 aaPredicted RBP17.63■□□□□ 0.41
COL9A3-206ENST00000466532 ENDOUP21128 410 aaKnown RBP17.63■□□□□ 0.41
COL9A3-206ENST00000466532 PHBP35232 272 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 TECRLQ5HYJ1 363 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 C1orf185Q5T7R7 199 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 C8orf74Q6P047 294 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 ZNF572Q7Z3I7 529 aaPredicted RBP17.63■□□□□ 0.41
COL9A3-206ENST00000466532 UCN3Q969E3 161 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 ATP6V1E2Q96A05 226 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 CDK15Q96Q40 435 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 ZNF559Q9BR84 538 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 NOL11Q9H8H0 719 aaKnown RBP17.63■□□□□ 0.41
COL9A3-206ENST00000466532 PROK2Q9HC23 129 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 ZDHHC18Q9NUE0 388 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 Q9UFV3 132 aa17.63■□□□□ 0.41
COL9A3-206ENST00000466532 LRRC3CA6NJW4 275 aa17.62■□□□□ 0.41
COL9A3-206ENST00000466532 FOXE1O00358 373 aaPredicted RBP17.62■□□□□ 0.41
COL9A3-206ENST00000466532 LRATO95237 230 aa17.62■□□□□ 0.41
COL9A3-206ENST00000466532 CLPSP04118 112 aa17.62■□□□□ 0.41
COL9A3-206ENST00000466532 SLC35E2P0CK97 266 aa17.62■□□□□ 0.41
COL9A3-206ENST00000466532 GALNSP34059 522 aa17.62■□□□□ 0.41
COL9A3-206ENST00000466532 TESK1Q15569 626 aa17.62■□□□□ 0.41
COL9A3-206ENST00000466532 OR52E8Q6IFG1 317 aa17.62■□□□□ 0.41
COL9A3-206ENST00000466532 METTL2BQ6P1Q9 378 aaKnown RBP17.62■□□□□ 0.41
COL9A3-206ENST00000466532 CLYBLQ8N0X4 340 aa17.62■□□□□ 0.41
COL9A3-206ENST00000466532 PLD6Q8N2A8 252 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms