RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 XKR7Q5GH72 579 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 ANKRD26P1Q6NSI1 321 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 FAM111BQ6SJ93 734 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 IGFL3Q6UXB1 125 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 RPS19BP1Q86WX3 136 aaKnown RBP10.85□□□□□ -0.67
CUX1-207ENST00000465461 CCDC116Q8IYX3 515 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 ST13P4Q8IZP2 240 aaPredicted RBP10.85□□□□□ -0.67
CUX1-207ENST00000465461 SLC5A8Q8N695 610 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 MORN4Q8NDC4 146 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 SIMC1Q8NDZ2 872 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 ADCY4Q8NFM4 1077 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 OR1N1Q8NGS0 311 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 OR14A16Q8NHC5 309 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 NUDT8Q8WV74 236 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 DAZLQ92904 295 aaKnown RBP10.85□□□□□ -0.67
CUX1-207ENST00000465461 RIT1Q92963 219 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 ZNF354BQ96LW1 612 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 TSSK3Q96PN8 268 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 C1orf50Q9BV19 199 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 ILKAPQ9H0C8 392 aaPredicted RBP10.85□□□□□ -0.67
CUX1-207ENST00000465461 EPN3Q9H201 632 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 MANSC1Q9H8J5 431 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 ANKRA2Q9H9E1 313 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 PFDN4Q9NQP4 134 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 MARCOQ9UEW3 520 aaPredicted RBP10.85□□□□□ -0.67
CUX1-207ENST00000465461 PPIEQ9UNP9 301 aaKnown RBP10.85□□□□□ -0.67
CUX1-207ENST00000465461 CPAMD8Q8IZJ3 1885 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 TMEM200CA6NKL6 621 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 GABRR3A8MPY1 467 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 WWP2O00308 870 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 AKAP10O43572 662 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 KLHL41O60662 606 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 NME6O75414 186 aaPredicted RBP10.84□□□□□ -0.67
CUX1-207ENST00000465461 CLPSP04118 112 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 COX7A2P14406 83 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 PORP16435 677 aaPredicted RBP10.84□□□□□ -0.67
CUX1-207ENST00000465461 SDC1P18827 310 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 SSTR4P31391 388 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 SOX18P35713 384 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 CD96P40200 585 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 HK2P52789 917 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 MLF1P58340 268 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 AP2B1P63010 937 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 TUBA3CQ13748 450 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 SPINK14Q6IE38 97 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 FAM71E1Q6IPT2 247 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 TUBA3EQ6PEY2 450 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 Q6ZS92 163 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 RNF165Q6ZSG1 346 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 ZNF605Q86T29 641 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 TICAM1Q8IUC6 712 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 C9orf40Q8IXQ3 194 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.84□□□□□ -0.67
CUX1-207ENST00000465461 TM9SF4Q92544 642 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 ZNF75CPQ92670 426 aaPredicted RBP10.84□□□□□ -0.67
CUX1-207ENST00000465461 HAS2Q92819 552 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 PNPLA2Q96AD5 504 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 TUBGCP3Q96CW5 907 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 C19orf60Q96EN9 201 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 FCRL1Q96LA6 429 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 ZNF681Q96N22 645 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 SIGLEC12Q96PQ1 595 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 HES7Q9BYE0 225 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 NUF2Q9BZD4 464 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 BRINP2Q9C0B6 783 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.84□□□□□ -0.67
CUX1-207ENST00000465461 MYNNQ9NPC7 610 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 SLAMF7Q9NQ25 335 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 ANAPC2Q9UJX6 822 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 B3GNT3Q9Y2A9 372 aa10.84□□□□□ -0.67
CUX1-207ENST00000465461 DYTNA2CJ06 578 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 TTLL8A6PVC2 850 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 HMGB1P1B2RPK0 211 aaPredicted RBP10.83□□□□□ -0.68
CUX1-207ENST00000465461 NPIPB8E9PQR5 432 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 ZNF354AO60765 605 aaPredicted RBP10.83□□□□□ -0.68
CUX1-207ENST00000465461 SNNO75324 88 aaPredicted RBP10.83□□□□□ -0.68
CUX1-207ENST00000465461 ITGA10O75578 1167 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 OR2J2O76002 312 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 ZFAND5O76080 213 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 SORBS2O94875 1100 aaKnown RBP10.83□□□□□ -0.68
CUX1-207ENST00000465461 IGKV3-11P04433 115 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 BCKDHAP12694 445 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 DRD2P14416 443 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 CSNK2A2P19784 350 aaPredicted RBP10.83□□□□□ -0.68
CUX1-207ENST00000465461 DDCP20711 480 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 CASRP41180 1078 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 PPP2R2AP63151 447 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 RNF4P78317 190 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 MRPS35P82673 323 aaKnown RBP10.83□□□□□ -0.68
CUX1-207ENST00000465461 OC90Q02509 493 aaPredicted RBP10.83□□□□□ -0.68
CUX1-207ENST00000465461 TLE1Q04724 770 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 MGAT2Q10469 447 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 HEPACAMQ14CZ8 416 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 EXOSC7Q15024 291 aaKnown RBP10.83□□□□□ -0.68
CUX1-207ENST00000465461 IGFBP7Q16270 282 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 PRICKLE4Q2TBC4 344 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 ATP6AP1LQ52LC2 224 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 TRMT12Q53H54 448 aaKnown RBP10.83□□□□□ -0.68
CUX1-207ENST00000465461 C6orf136Q5SQH8 315 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 IL23RQ5VWK5 629 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms