RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 A0A1W2PP18 115 aa8.51□□□□□ -1.05
APP-213ENST00000464867 FRG2CA6NGY1 282 aa8.51□□□□□ -1.05
APP-213ENST00000464867 H3BMM5 538 aa8.51□□□□□ -1.05
APP-213ENST00000464867 PFDN6O15212 129 aa8.51□□□□□ -1.05
APP-213ENST00000464867 NRDCO43847 1150 aa8.51□□□□□ -1.05
APP-213ENST00000464867 ZNF189O75820 626 aaPredicted RBP8.51□□□□□ -1.05
APP-213ENST00000464867 TNFSF13O75888 250 aa8.51□□□□□ -1.05
APP-213ENST00000464867 SNX4O95219 450 aa8.51□□□□□ -1.05
APP-213ENST00000464867 PLAUP00749 431 aa8.51□□□□□ -1.05
APP-213ENST00000464867 CRHP06850 196 aa8.51□□□□□ -1.05
APP-213ENST00000464867 CPN1P15169 458 aa8.51□□□□□ -1.05
APP-213ENST00000464867 ITGA2P17301 1181 aa8.51□□□□□ -1.05
APP-213ENST00000464867 TBXA2RP21731 343 aa8.51□□□□□ -1.05
APP-213ENST00000464867 RPS3P23396 243 aaKnown RBP eCLIP8.51□□□□□ -1.057e-8■■■□□ 16.2
APP-213ENST00000464867 IGFBP5P24593 272 aa8.51□□□□□ -1.05
APP-213ENST00000464867 HNF4AP41235 474 aa8.51□□□□□ -1.05
APP-213ENST00000464867 SLC1A1P43005 524 aa8.51□□□□□ -1.05
APP-213ENST00000464867 GZMKP49863 264 aa8.51□□□□□ -1.05
APP-213ENST00000464867 NUDT6P53370 316 aa8.51□□□□□ -1.05
APP-213ENST00000464867 RAB8AP61006 207 aa8.51□□□□□ -1.05
APP-213ENST00000464867 CCZ1BP86790 482 aa8.51□□□□□ -1.05
APP-213ENST00000464867 CCZ1P86791 482 aaPredicted RBP8.51□□□□□ -1.05
APP-213ENST00000464867 SRYQ05066 204 aa8.51□□□□□ -1.05
APP-213ENST00000464867 NRF1Q16656 503 aa8.51□□□□□ -1.05
APP-213ENST00000464867 PARP6Q2NL67 630 aa8.51□□□□□ -1.05
APP-213ENST00000464867 MIDNQ504T8 468 aa8.51□□□□□ -1.05
APP-213ENST00000464867 PRR31Q5SQ13 230 aa8.51□□□□□ -1.05
APP-213ENST00000464867 DARS2Q6PI48 645 aaKnown RBP8.51□□□□□ -1.05
APP-213ENST00000464867 ENPP6Q6UWR7 440 aa8.51□□□□□ -1.05
APP-213ENST00000464867 PLXDC2Q6UX71 529 aa8.51□□□□□ -1.05
APP-213ENST00000464867 P4HA3Q7Z4N8 544 aa8.51□□□□□ -1.05
APP-213ENST00000464867 WFDC3Q8IUB2 231 aa8.51□□□□□ -1.05
APP-213ENST00000464867 SCUBE1Q8IWY4 988 aa8.51□□□□□ -1.05
APP-213ENST00000464867 SMAP2Q8WU79 429 aaPredicted RBP8.51□□□□□ -1.05
APP-213ENST00000464867 DIO2Q92813 273 aa8.51□□□□□ -1.05
APP-213ENST00000464867 GCDHQ92947 438 aaPredicted RBP8.51□□□□□ -1.05
APP-213ENST00000464867 PLPPR2Q96GM1 343 aa8.51□□□□□ -1.05
APP-213ENST00000464867 FAR2Q96K12 515 aa8.51□□□□□ -1.05
APP-213ENST00000464867 RUNDC3BQ96NL0 473 aa8.51□□□□□ -1.05
APP-213ENST00000464867 TUBA1CQ9BQE3 449 aa8.51□□□□□ -1.05
APP-213ENST00000464867 KLHL4Q9C0H6 718 aa8.51□□□□□ -1.05
APP-213ENST00000464867 P2RY12Q9H244 342 aa8.51□□□□□ -1.05
APP-213ENST00000464867 DCTN4Q9UJW0 460 aa8.51□□□□□ -1.05
APP-213ENST00000464867 IKBKGQ9Y6K9 419 aa8.51□□□□□ -1.05
APP-213ENST00000464867 IGHV4-30-2A0A087WSY4 118 aa8.5□□□□□ -1.05
APP-213ENST00000464867 UQCRHLA0A096LP55 91 aa8.5□□□□□ -1.05
APP-213ENST00000464867 MACROD2A1Z1Q3 448 aa8.5□□□□□ -1.05
APP-213ENST00000464867 E5RI56 91 aa8.5□□□□□ -1.05
APP-213ENST00000464867 APOC4-APOC2K7ER74 178 aa8.5□□□□□ -1.05
APP-213ENST00000464867 TP53I11O14683 189 aa8.5□□□□□ -1.05
APP-213ENST00000464867 CD3EAPO15446 510 aaKnown RBP8.5□□□□□ -1.05
APP-213ENST00000464867 KLF4O43474 513 aa8.5□□□□□ -1.05
APP-213ENST00000464867 SPOPO43791 374 aa8.5□□□□□ -1.05
APP-213ENST00000464867 ZNF354AO60765 605 aaPredicted RBP8.5□□□□□ -1.05
APP-213ENST00000464867 APOC2P02655 101 aa8.5□□□□□ -1.05
APP-213ENST00000464867 SOD3P08294 240 aa8.5□□□□□ -1.05
APP-213ENST00000464867 SLC25A16P16260 332 aa8.5□□□□□ -1.05
APP-213ENST00000464867 CCND1P24385 295 aa8.5□□□□□ -1.05
APP-213ENST00000464867 DPP4P27487 766 aa8.5□□□□□ -1.05
APP-213ENST00000464867 MSH2P43246 934 aa8.5□□□□□ -1.05
APP-213ENST00000464867 COMPP49747 757 aaPredicted RBP8.5□□□□□ -1.05
APP-213ENST00000464867 CCR8P51685 355 aa8.5□□□□□ -1.05
APP-213ENST00000464867 TBPL1P62380 186 aa8.5□□□□□ -1.05
APP-213ENST00000464867 MYL5Q02045 173 aa8.5□□□□□ -1.05
APP-213ENST00000464867 STX4Q12846 297 aa8.5□□□□□ -1.05
APP-213ENST00000464867 FAPQ12884 760 aa8.5□□□□□ -1.05
APP-213ENST00000464867 TTLL9Q3SXZ7 439 aa8.5□□□□□ -1.05
APP-213ENST00000464867 DCST1Q5T197 706 aa8.5□□□□□ -1.05
APP-213ENST00000464867 TSTD2Q5T7W7 516 aa8.5□□□□□ -1.05
APP-213ENST00000464867 ZNF474Q6S9Z5 364 aaPredicted RBP8.5□□□□□ -1.05
APP-213ENST00000464867 NXPE4Q6UWF7 544 aa8.5□□□□□ -1.05
APP-213ENST00000464867 CLEC17AQ6ZS10 378 aa8.5□□□□□ -1.05
APP-213ENST00000464867 ZNF534Q76KX8 674 aa8.5□□□□□ -1.05
APP-213ENST00000464867 CHMP1BQ7LBR1 199 aa8.5□□□□□ -1.05
APP-213ENST00000464867 ZNF595Q8IYB9 648 aa8.5□□□□□ -1.05
APP-213ENST00000464867 LRRC56Q8IYG6 542 aaPredicted RBP8.5□□□□□ -1.05
APP-213ENST00000464867 CA13Q8N1Q1 262 aa8.5□□□□□ -1.05
APP-213ENST00000464867 PLD6Q8N2A8 252 aaKnown RBP8.5□□□□□ -1.05
APP-213ENST00000464867 MPP5Q8N3R9 675 aa8.5□□□□□ -1.05
APP-213ENST00000464867 OTUD6BQ8N6M0 293 aa8.5□□□□□ -1.05
APP-213ENST00000464867 OR10G3Q8NGC4 313 aa8.5□□□□□ -1.05
APP-213ENST00000464867 NT5CQ8TCD5 201 aa8.5□□□□□ -1.05
APP-213ENST00000464867 UTP15Q8TED0 518 aaKnown RBP8.5□□□□□ -1.05
APP-213ENST00000464867 ZFAND2BQ8WV99 257 aa8.5□□□□□ -1.05
APP-213ENST00000464867 FAM136AQ96C01 138 aa8.5□□□□□ -1.05
APP-213ENST00000464867 STARD4Q96DR4 205 aa8.5□□□□□ -1.05
APP-213ENST00000464867 C1orf159Q96HA4 380 aa8.5□□□□□ -1.05
APP-213ENST00000464867 OPN3Q9H1Y3 402 aaPredicted RBP8.5□□□□□ -1.05
APP-213ENST00000464867 FANCFQ9NPI8 374 aa8.5□□□□□ -1.05
APP-213ENST00000464867 DNAJC11Q9NVH1 559 aa8.5□□□□□ -1.05
APP-213ENST00000464867 SLC2A6Q9UGQ3 507 aa8.5□□□□□ -1.05
APP-213ENST00000464867 RIMKLBQ9ULI2 386 aa8.5□□□□□ -1.05
APP-213ENST00000464867 U3KQE9 123 aa8.5□□□□□ -1.05
APP-213ENST00000464867 hCG_1818297A0A087WSY0 165 aa8.49□□□□□ -1.05
APP-213ENST00000464867 ANKRD33BA6NCL7 494 aa8.49□□□□□ -1.05
APP-213ENST00000464867 CAPN14A8MX76 684 aa8.49□□□□□ -1.05
APP-213ENST00000464867 C17orf105B2RV13 164 aa8.49□□□□□ -1.05
APP-213ENST00000464867 OR10H2O60403 315 aa8.49□□□□□ -1.05
APP-213ENST00000464867 TRIM3O75382 744 aaPredicted RBP8.49□□□□□ -1.05
APP-213ENST00000464867 IGHV4-31P0DP07 118 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms