RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 SLC28A1O00337 649 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 FLRT2O43155 660 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 PSMD3O43242 534 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 DNAJB6O75190 326 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 MTRF1O75570 445 aaKnown RBP3.48□□□□□ -1.85
ITGB1-208ENST00000464001 MFN2O95140 757 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 GPIP06744 558 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 ZNF18P17022 549 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 CA4P22748 312 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 PIK3R1P27986 724 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 HLA-FP30511 346 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 RFC2P35250 354 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 OR3A1P47881 315 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 LHX1P48742 406 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 DLK1P80370 383 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 CNTN2Q02246 1040 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 LIPEQ05469 1076 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 TRDNQ13061 729 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 SRSF5Q13243 272 aaKnown RBP3.48□□□□□ -1.85
ITGB1-208ENST00000464001 CARTPTQ16568 116 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 PRR27Q6MZM9 219 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 KIF6Q6ZMV9 814 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 ANKRD46Q86W74 232 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 HOGA1Q86XE5 327 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 MISPQ8IVT2 679 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 BCORP1Q8N888 145 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 C17orf47Q8NEP4 570 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 OR4A16Q8NH70 328 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 LILRB4Q8NHJ6 448 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 OLIG1Q8TAK6 271 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 DQX1Q8TE96 717 aaKnown RBP3.48□□□□□ -1.85
ITGB1-208ENST00000464001 RNF128Q8TEB7 428 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.48□□□□□ -1.85
ITGB1-208ENST00000464001 STARD8Q92502 1023 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 GTF3AQ92664 365 aaKnown RBP3.48□□□□□ -1.85
ITGB1-208ENST00000464001 TMIGD2Q96BF3 282 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 MOB3AQ96BX8 217 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 C4orf36Q96KX1 117 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 SFXN2Q96NB2 322 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 OR6C1Q96RD1 312 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 FAM192AQ9GZU8 254 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 WWTR1Q9GZV5 400 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 XKR8Q9H6D3 395 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 PRR34Q9NV39 138 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 RHCGQ9UBD6 479 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 ZDHHC2Q9UIJ5 367 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 SH3GLB1Q9Y371 365 aa3.48□□□□□ -1.85
ITGB1-208ENST00000464001 DDX49Q9Y6V7 483 aaKnown RBP3.48□□□□□ -1.85
ITGB1-208ENST00000464001 AKNAQ7Z591 1439 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 A0A075B6Q4 140 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 A0A087X0K7 114 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 ILVBLA1L0T0 632 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 TMEM89A2RUT3 159 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 FAM149AA5PLN7 773 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 SSX4O60224 188 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 GMNNO75496 209 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 LUC7L3O95232 432 aaKnown RBP3.47□□□□□ -1.85
ITGB1-208ENST00000464001 CLDN1O95832 211 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 MBD3O95983 291 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 GSRP00390 522 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 MMP10P09238 476 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 NUDT17P0C025 328 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 CPA3P15088 417 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 RDXP35241 583 aaKnown RBP3.47□□□□□ -1.85
ITGB1-208ENST00000464001 ADRA1AP35348 466 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 CETN2P41208 172 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 EPS15P42566 896 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 SLC1A3P43003 542 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 IER3P46695 156 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 CDX1P47902 265 aaPredicted RBP3.47□□□□□ -1.85
ITGB1-208ENST00000464001 PRMT2P55345 433 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 CX3CL1P78423 397 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 FUT7Q11130 342 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 PDIA5Q14554 519 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 ANKRD55Q3KP44 614 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 ADPRMQ3LIE5 342 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 TMPRSS11BQ86T26 416 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 FAM228AQ86W67 206 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 LACC1Q8IV20 430 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 STHQ8IWL8 128 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 MAPKAPK5-AS1Q8N8E1 139 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 OR2L2Q8NH16 312 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 OR8K3Q8NH51 312 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 OR52J3Q8NH60 311 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 VANGL1Q8TAA9 524 aaPredicted RBP3.47□□□□□ -1.85
ITGB1-208ENST00000464001 ATP8B4Q8TF62 1192 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 ULK4Q96C45 1275 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 C11orf24Q96F05 449 aaPredicted RBP3.47□□□□□ -1.85
ITGB1-208ENST00000464001 PGM2Q96G03 612 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 SLC41A3Q96GZ6 507 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 RASL10BQ96S79 203 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 GPA33Q99795 319 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 MTG1Q9BT17 334 aaPredicted RBP3.47□□□□□ -1.85
ITGB1-208ENST00000464001 FICDQ9BVA6 458 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 FNDC11Q9BVV2 318 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 DGCR6LQ9BY27 220 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 VN1R1Q9GZP7 353 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 GLT8D2Q9H1C3 349 aa3.47□□□□□ -1.85
ITGB1-208ENST00000464001 SNX25Q9H3E2 840 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms