RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 ANKRD33BA6NCL7 494 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 SAP18O00422 153 aaKnown RBP19.02■□□□□ 0.64
CPSF7-209ENST00000463244 CCNT2O60583 730 aaKnown RBP19.02■□□□□ 0.64
CPSF7-209ENST00000463244 IL2RAP01589 272 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 ALOX15P16050 662 aaPredicted RBP19.02■□□□□ 0.64
CPSF7-209ENST00000463244 HERVK_113P63132 956 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 ERVK-8P63133 956 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 TNFRSF17Q02223 184 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 LTBQ06643 244 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 ILF2Q12905 390 aaKnown RBP19.02■□□□□ 0.64
CPSF7-209ENST00000463244 SLAMF1Q13291 335 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 KEAP1Q14145 624 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 EBPQ15125 230 aaKnown RBP19.02■□□□□ 0.64
CPSF7-209ENST00000463244 SPRED3Q2MJR0 410 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 KHDRBS2Q5VWX1 349 aaKnown RBP19.02■□□□□ 0.64
CPSF7-209ENST00000463244 FBXW10Q5XX13 1052 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 OR4C11Q6IEV9 310 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 LRRC70Q7Z2Q7 622 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 SLC35F6Q8N357 371 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 DOK4Q8TEW6 326 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 ERVK-6Q9BXR3 956 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 PLEKHF2Q9H8W4 249 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 ERVK-19Q9WJR5 959 aa19.02■□□□□ 0.64
CPSF7-209ENST00000463244 MTO1Q9Y2Z2 717 aaKnown RBP19.02■□□□□ 0.64
CPSF7-209ENST00000463244 ARID1AO14497 2285 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 IQANK1A0A1B0GTG1 560 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 TP73O15350 636 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 PHGDHO43175 533 aaKnown RBP19.01■□□□□ 0.63
CPSF7-209ENST00000463244 PIAS1O75925 651 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 PCNAP12004 261 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 SERPINB1P30740 379 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 SLC37A1P57057 533 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 ATP6V0D1P61421 351 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 PDIA2Q13087 525 aaKnown RBP19.01■□□□□ 0.63
CPSF7-209ENST00000463244 TBCELQ5QJ74 424 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 DEPDC1Q5TB30 811 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 NSUN5P2Q63ZY6 315 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 C18orf63Q68DL7 685 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 MED27Q6P2C8 311 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 RNF111Q6ZNA4 994 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 SYDE1Q6ZW31 735 aaPredicted RBP19.01■□□□□ 0.63
CPSF7-209ENST00000463244 GPR180Q86V85 440 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 KIF18BQ86Y91 864 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 PM20D2Q8IYS1 436 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 OR7G3Q8NG95 312 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 DIO2Q92813 273 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 HSPBAP1Q96EW2 488 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 TSPAN17Q96FV3 270 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 CMTM7Q96FZ5 175 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 SMR3AQ99954 134 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 CD244Q9BZW8 370 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 OR51B5Q9H339 312 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 UBQLN3Q9H347 655 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 PRM3Q9NNZ6 103 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 SMYD2Q9NRG4 433 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 IKBKGQ9Y6K9 419 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 EXPH5Q8NEV8 1989 aa19.01■□□□□ 0.63
CPSF7-209ENST00000463244 OR6C76A6NM76 312 aa19■□□□□ 0.63
CPSF7-209ENST00000463244 E7ESA3 106 aa19■□□□□ 0.63
CPSF7-209ENST00000463244 PRKRAO75569 313 aaKnown RBP19■□□□□ 0.63
CPSF7-209ENST00000463244 SEC31AO94979 1220 aaKnown RBP19■□□□□ 0.63
CPSF7-209ENST00000463244 HPNP05981 417 aa19■□□□□ 0.63
CPSF7-209ENST00000463244 HOXC12P31275 282 aa19■□□□□ 0.63
CPSF7-209ENST00000463244 TLX1P31314 330 aaPredicted RBP19■□□□□ 0.63
CPSF7-209ENST00000463244 HNRNPH2P55795 449 aaKnown RBP19■□□□□ 0.63
CPSF7-209ENST00000463244 SORDQ00796 357 aa19■□□□□ 0.63
CPSF7-209ENST00000463244 ZNF267Q14586 743 aaPredicted RBP19■□□□□ 0.63
CPSF7-209ENST00000463244 SF3B4Q15427 424 aaKnown RBP eCLIP19■□□□□ 0.639e-11■■■■■ 36
CPSF7-209ENST00000463244 TMEM198Q66K66 360 aa19■□□□□ 0.63
CPSF7-209ENST00000463244 VASNQ6EMK4 673 aa19■□□□□ 0.63
CPSF7-209ENST00000463244 TAGAPQ8N103 731 aa19■□□□□ 0.63
CPSF7-209ENST00000463244 LINC01560Q8TB33 94 aa19■□□□□ 0.63
CPSF7-209ENST00000463244 C18orf12Q96KH6 178 aa19■□□□□ 0.63
CPSF7-209ENST00000463244 PELOQ9BRX2 385 aaKnown RBP19■□□□□ 0.63
CPSF7-209ENST00000463244 PHF11Q9UIL8 331 aa19■□□□□ 0.63
CPSF7-209ENST00000463244 TP53I11O14683 189 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 TRAPPC6AO75865 159 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 GOSR1O95249 250 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 CLPSP04118 112 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 CDK9P50750 372 aaKnown RBP18.99■□□□□ 0.63
CPSF7-209ENST00000463244 PCDH1Q08174 1060 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 RPS6KA2Q15349 733 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 NHSL2Q5HYW2 709 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 BICRALQ6AI39 1079 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 ZCCHC7Q8N3Z6 543 aaKnown RBP18.99■□□□□ 0.63
CPSF7-209ENST00000463244 RNF175Q8N4F7 328 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 ZNF441Q8N8Z8 693 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 RIT1Q92963 219 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 RGMAQ96B86 450 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 EPB41L4BQ9H329 900 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 JKAMPQ9P055 326 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 RNF112Q9ULX5 631 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 CAMK2AQ9UQM7 478 aa18.99■□□□□ 0.63
CPSF7-209ENST00000463244 A0A1B0GTL3 188 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 MBD3L4A6NDZ8 208 aaPredicted RBP18.98■□□□□ 0.63
CPSF7-209ENST00000463244 MBD3L3A6NE82 208 aaPredicted RBP18.98■□□□□ 0.63
CPSF7-209ENST00000463244 MBD3L5A6NJ08 208 aaPredicted RBP18.98■□□□□ 0.63
CPSF7-209ENST00000463244 CD8B2A6NJW9 211 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 PLPP1O14494 284 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 OR10H2O60403 315 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms