RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SPRED3Q2MJR0 410 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 C18orf63Q68DL7 685 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 NEIL3Q8TAT5 605 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 ZNF597Q96LX8 424 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 ATOH8Q96SQ7 321 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 POLDIP3Q9BY77 421 aaKnown RBP14.17□□□□□ -0.14
SKA3-204ENST00000462482 WWTR1Q9GZV5 400 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 ACKR4Q9NPB9 350 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 TSC22D4Q9Y3Q8 395 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 TNPO3Q9Y5L0 923 aaKnown RBP14.17□□□□□ -0.14
SKA3-204ENST00000462482 PLPP1O14494 284 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 PROM1O43490 865 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 UGDHO60701 494 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 NADKO95544 446 aaPredicted RBP14.16□□□□□ -0.14
SKA3-204ENST00000462482 FAM58BPP0C7Q3 252 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 DNAJA1P31689 397 aaKnown RBP14.16□□□□□ -0.14
SKA3-204ENST00000462482 GALNSP34059 522 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 ADH7P40394 386 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 TRPC1P48995 793 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 PLTPP55058 493 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 HNRNPH2P55795 449 aaKnown RBP14.16□□□□□ -0.14
SKA3-204ENST00000462482 NRG3P56975 720 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 GPX6P59796 221 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 RPS13P62277 151 aaKnown RBP14.16□□□□□ -0.14
SKA3-204ENST00000462482 PFKFB4Q16877 469 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 NUDT13Q86X67 352 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 ZZZ3Q8IYH5 903 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 ULK2Q8IYT8 1036 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 LRRC25Q8N386 305 aaPredicted RBP14.16□□□□□ -0.14
SKA3-204ENST00000462482 SPATA4Q8NEY3 305 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 OR10G3Q8NGC4 313 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 GOT1L1Q8NHS2 421 aaPredicted RBP14.16□□□□□ -0.14
SKA3-204ENST00000462482 RHEBL1Q8TAI7 183 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 FBF1Q8TES7 1133 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 DIO2Q92813 273 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 ATP6V1E2Q96A05 226 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 NXNL1Q96CM4 212 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 RAB17Q9H0T7 212 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 SLC6A15Q9H2J7 730 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 SH2D2AQ9NP31 389 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 SNX15Q9NRS6 342 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 IGSF5Q9NSI5 407 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 SPRR3Q9UBC9 169 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 MTRF1LQ9UGC7 380 aaKnown RBP14.16□□□□□ -0.14
SKA3-204ENST00000462482 L3MBTL1Q9Y468 752 aa14.16□□□□□ -0.14
SKA3-204ENST00000462482 C2orf92A0A1B0GVN3 265 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 AHRRA9YTQ3 701 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 H0YIV9 168 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 HRKO00198 91 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 RAD51CO43502 376 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 TRAPPC6AO75865 159 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 FAM155BO75949 473 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 RFPL3SP0C7P2 107 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 SLC35E2P0CK97 266 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 KRT15P19012 456 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 PIK3R1P27986 724 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 MAGEA4P43358 317 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 MASP1P48740 699 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 ALDH18A1P54886 795 aaKnown RBP14.15□□□□□ -0.14
SKA3-204ENST00000462482 SLC37A1P57057 533 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 PPP2R2AP63151 447 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 DLG1Q12959 904 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 CUL3Q13618 768 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 SETDB1Q15047 1291 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 EBPQ15125 230 aaKnown RBP14.15□□□□□ -0.14
SKA3-204ENST00000462482 RPS6KA2Q15349 733 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 NTRK2Q16620 822 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 CPSF6Q16630 551 aaKnown RBP eCLIP14.15□□□□□ -0.14
SKA3-204ENST00000462482 OR52E8Q6IFG1 317 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 LYPD8Q6UX82 237 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 DGAT2L6Q6ZPD8 337 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 PACS2Q86VP3 889 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 LIX1LQ8IVB5 337 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 PM20D2Q8IYS1 436 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 RNF175Q8N4F7 328 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 DOK4Q8TEW6 326 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 KCTD4Q8WVF5 259 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 NINJ1Q92982 152 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 GRHL1Q9NZI5 618 aa14.15□□□□□ -0.14
SKA3-204ENST00000462482 CHCHD2Q9Y6H1 151 aaPredicted RBP14.15□□□□□ -0.14
SKA3-204ENST00000462482 TACC2O95359 2948 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 ANKRD33BA6NCL7 494 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 LRRC3CA6NJW4 275 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 GLOD5A6NK44 160 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 PRKRAO75569 313 aaKnown RBP14.14□□□□□ -0.15
SKA3-204ENST00000462482 SNX4O95219 450 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 LRATO95237 230 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 IL2RAP01589 272 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 C1QAP02745 245 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 CD99P14209 185 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 BMP5P22003 454 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 GCKP35557 465 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 GMPRP36959 345 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 ASCL1P50553 236 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 IST1P53990 364 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 DLX5P56178 289 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 GTF2H2Q13888 395 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 ACAP2Q15057 778 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 TOMM20Q15388 145 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 FBXW10Q5XX13 1052 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms